Gene Sfum_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0358 
Symbol 
ID4460875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp423156 
End bp425162 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content59% 
IMG OID639701113 
ProductN-acyl-D-glucosamine 2-epimerase 
Protein accessionYP_844493 
Protein GI116747806 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0710047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.860771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAC TCAATCAGAA AATGACGGTG CTCGGAACGG TCGTTGATGT GCAGGACCTC 
GGTTTTACCC TGCGTCTTCG CACCGGCGAC AACCTGACGG TCTGTGTCGG GGCCGGGACT
TCGTTCATGG TCCTGAGCAA CCTCGACGGC TTGATCTACG ATCGTTTTCC CGAACCGGAC
AATGTCCCCG TCGTTGCGGG AGACGACGAC ATCACGAAGG GCATAAAGTA CAAAGTCAAA
AAGTACATAT GCTCCGGGCA AAAGATGTAC GTTCAGGGCA CTTTCTTTCA GAATGCGGGC
AACGAACGGT TCGAGGCCCT TGCGGTCCGC CCGTTTCACT ACCAGCCCGA CAAGTTCCTC
TTCGAACACC ACACGCATTG GTGGCTGTCG CAAATGGCCA CAATGGCCGA CCAGTGGCTC
CAGAGCCTTT TCGGGGACTC CCGCACCTAT GACGAAAGCG ATTTCTCGCG CCTCTACCGG
ACGAATCTGA ACATCTACGG GGGGAAGACG GACGACGATA TCCAGGACAT GGCAACGCTG
TCGCGCCTCA TCTACGGACT CTCCTCGGCC TACCTGCTGC TCGGCGACCG GCGCTACCTG
GACGCGGCCG CAGCGGGCGT GGATTTCCAG CGGACCGCCT TCCGCTCGTT GAGCCACGAC
GGGCGCACCA TCATCTGGAG CCATGCGCGC AGGAAGCTCG TCAACGGCAA CCTGACCTAT
ATTCCCTCCC TCATGGGGGA TGACGCGGGA ACCATACCGC TCTACGAACA AATCTACGCT
CTTGCCGGCA TGACGCAGTA TTTTCGAATC ACCGGGGACC CGGAAGTCCT GGACGACATC
ATGCGGACGG TCCGCGCGTT CAACACCTTT TTCCTGGACG ACAGTGCGGT CGTCCCCGAA
TATCCGGGAA AGAAGGGGTA TTTCAGCCAT ATCGACCCGG CAACCATGCG GGCCGACTCG
CCGGCGCTCG CGCACAACCG CCTCCGTAAG AACTGGAATT CCATCGGCGA CCACATTCCG
GCCTATCTCG TCAACCTCAT CCTGGCCCTG GACCCCCTTC CCCAGGGCGC AGGGAAGGAC
ATCGAGAGGT TCTTGAAAAA GTGCGAGGAC ATGCTGGACC TCACCACGGA CCTCATCATC
GAGAAGTTTC CGGAGGCGGA CTGTCCCTAC GTCAACGAAC GGTTCTTTGC CGACTGGACA
CCCGATCAGG GCTGGCAATG GCAGCAGAAC AGGGCAATCG TGGGCCACAA CCTGAAAATC
GCCTGGAATC TCACGCGGGT GGCCAATTAC TACAGCTACA AAGGGCAGGA TCAGAAGGCC
AAACGGGCGA TGCAACTGGC CGAGCAACTG GGGAAAGCCA TGGTCGACGC CGGCCTGGAC
AAGGTGCGCG GCGGGTGTTT CGACGCCGTG GAGCGCAAAC CGAAGAGCCC CGGGGAAATC
CAGTTCGTCT GGGGAAACCA CAAGGACTTC TGGCAGCAGG AGCAAAACGT ACTGGCCTAC
CTCATTTTGT ACGGTTACAC GGGAACTAAT CTGTACCGCG ATCTCTTCCG GGACGCCGCC
GCTTGGTGGA ACACGTTTCA GTTGGACCGG GACAACCGCG GAGTCTTCTT CAGGGTCAGC
GACAACGGCG ATCCGTTTAT CTCCGGCCGC GGCATGGCGG GTTTCGACAT CGCGGGCTAC
CACTCGTTCG AGCTGAACTT CCTGGCTCAC ATCTACCTGA GAACCTTCGT GTATTCGGGA
GCGGGCGTGG CGACAAAGGA CGACCGCTCC GAAGCGGGAG CGGACTTCTG CCTCTATTTT
TGGCCCGCCG AGCGGAGCCA GATCCAGTCG CTGAACGTGC TGCCCGATTT CATGAGCCCG
GGGGTCCTCG ACATCACCAG CATCAAAGTG AACGGAAAGG AGCGCAAGTT CATGGCTCAG
GAGGACTTCC AGATCCCGCT TCAGCCCGAT GAGCTCGGTA AGGAGATCGT GGTCAGTTTT
CGGTCCGGGC GGCTGCACAA ACAGTGA
 
Protein sequence
MKSLNQKMTV LGTVVDVQDL GFTLRLRTGD NLTVCVGAGT SFMVLSNLDG LIYDRFPEPD 
NVPVVAGDDD ITKGIKYKVK KYICSGQKMY VQGTFFQNAG NERFEALAVR PFHYQPDKFL
FEHHTHWWLS QMATMADQWL QSLFGDSRTY DESDFSRLYR TNLNIYGGKT DDDIQDMATL
SRLIYGLSSA YLLLGDRRYL DAAAAGVDFQ RTAFRSLSHD GRTIIWSHAR RKLVNGNLTY
IPSLMGDDAG TIPLYEQIYA LAGMTQYFRI TGDPEVLDDI MRTVRAFNTF FLDDSAVVPE
YPGKKGYFSH IDPATMRADS PALAHNRLRK NWNSIGDHIP AYLVNLILAL DPLPQGAGKD
IERFLKKCED MLDLTTDLII EKFPEADCPY VNERFFADWT PDQGWQWQQN RAIVGHNLKI
AWNLTRVANY YSYKGQDQKA KRAMQLAEQL GKAMVDAGLD KVRGGCFDAV ERKPKSPGEI
QFVWGNHKDF WQQEQNVLAY LILYGYTGTN LYRDLFRDAA AWWNTFQLDR DNRGVFFRVS
DNGDPFISGR GMAGFDIAGY HSFELNFLAH IYLRTFVYSG AGVATKDDRS EAGADFCLYF
WPAERSQIQS LNVLPDFMSP GVLDITSIKV NGKERKFMAQ EDFQIPLQPD ELGKEIVVSF
RSGRLHKQ