Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0358 |
Symbol | |
ID | 4460875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 423156 |
End bp | 425162 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639701113 |
Product | N-acyl-D-glucosamine 2-epimerase |
Protein accession | YP_844493 |
Protein GI | 116747806 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0710047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.860771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAC TCAATCAGAA AATGACGGTG CTCGGAACGG TCGTTGATGT GCAGGACCTC GGTTTTACCC TGCGTCTTCG CACCGGCGAC AACCTGACGG TCTGTGTCGG GGCCGGGACT TCGTTCATGG TCCTGAGCAA CCTCGACGGC TTGATCTACG ATCGTTTTCC CGAACCGGAC AATGTCCCCG TCGTTGCGGG AGACGACGAC ATCACGAAGG GCATAAAGTA CAAAGTCAAA AAGTACATAT GCTCCGGGCA AAAGATGTAC GTTCAGGGCA CTTTCTTTCA GAATGCGGGC AACGAACGGT TCGAGGCCCT TGCGGTCCGC CCGTTTCACT ACCAGCCCGA CAAGTTCCTC TTCGAACACC ACACGCATTG GTGGCTGTCG CAAATGGCCA CAATGGCCGA CCAGTGGCTC CAGAGCCTTT TCGGGGACTC CCGCACCTAT GACGAAAGCG ATTTCTCGCG CCTCTACCGG ACGAATCTGA ACATCTACGG GGGGAAGACG GACGACGATA TCCAGGACAT GGCAACGCTG TCGCGCCTCA TCTACGGACT CTCCTCGGCC TACCTGCTGC TCGGCGACCG GCGCTACCTG GACGCGGCCG CAGCGGGCGT GGATTTCCAG CGGACCGCCT TCCGCTCGTT GAGCCACGAC GGGCGCACCA TCATCTGGAG CCATGCGCGC AGGAAGCTCG TCAACGGCAA CCTGACCTAT ATTCCCTCCC TCATGGGGGA TGACGCGGGA ACCATACCGC TCTACGAACA AATCTACGCT CTTGCCGGCA TGACGCAGTA TTTTCGAATC ACCGGGGACC CGGAAGTCCT GGACGACATC ATGCGGACGG TCCGCGCGTT CAACACCTTT TTCCTGGACG ACAGTGCGGT CGTCCCCGAA TATCCGGGAA AGAAGGGGTA TTTCAGCCAT ATCGACCCGG CAACCATGCG GGCCGACTCG CCGGCGCTCG CGCACAACCG CCTCCGTAAG AACTGGAATT CCATCGGCGA CCACATTCCG GCCTATCTCG TCAACCTCAT CCTGGCCCTG GACCCCCTTC CCCAGGGCGC AGGGAAGGAC ATCGAGAGGT TCTTGAAAAA GTGCGAGGAC ATGCTGGACC TCACCACGGA CCTCATCATC GAGAAGTTTC CGGAGGCGGA CTGTCCCTAC GTCAACGAAC GGTTCTTTGC CGACTGGACA CCCGATCAGG GCTGGCAATG GCAGCAGAAC AGGGCAATCG TGGGCCACAA CCTGAAAATC GCCTGGAATC TCACGCGGGT GGCCAATTAC TACAGCTACA AAGGGCAGGA TCAGAAGGCC AAACGGGCGA TGCAACTGGC CGAGCAACTG GGGAAAGCCA TGGTCGACGC CGGCCTGGAC AAGGTGCGCG GCGGGTGTTT CGACGCCGTG GAGCGCAAAC CGAAGAGCCC CGGGGAAATC CAGTTCGTCT GGGGAAACCA CAAGGACTTC TGGCAGCAGG AGCAAAACGT ACTGGCCTAC CTCATTTTGT ACGGTTACAC GGGAACTAAT CTGTACCGCG ATCTCTTCCG GGACGCCGCC GCTTGGTGGA ACACGTTTCA GTTGGACCGG GACAACCGCG GAGTCTTCTT CAGGGTCAGC GACAACGGCG ATCCGTTTAT CTCCGGCCGC GGCATGGCGG GTTTCGACAT CGCGGGCTAC CACTCGTTCG AGCTGAACTT CCTGGCTCAC ATCTACCTGA GAACCTTCGT GTATTCGGGA GCGGGCGTGG CGACAAAGGA CGACCGCTCC GAAGCGGGAG CGGACTTCTG CCTCTATTTT TGGCCCGCCG AGCGGAGCCA GATCCAGTCG CTGAACGTGC TGCCCGATTT CATGAGCCCG GGGGTCCTCG ACATCACCAG CATCAAAGTG AACGGAAAGG AGCGCAAGTT CATGGCTCAG GAGGACTTCC AGATCCCGCT TCAGCCCGAT GAGCTCGGTA AGGAGATCGT GGTCAGTTTT CGGTCCGGGC GGCTGCACAA ACAGTGA
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Protein sequence | MKSLNQKMTV LGTVVDVQDL GFTLRLRTGD NLTVCVGAGT SFMVLSNLDG LIYDRFPEPD NVPVVAGDDD ITKGIKYKVK KYICSGQKMY VQGTFFQNAG NERFEALAVR PFHYQPDKFL FEHHTHWWLS QMATMADQWL QSLFGDSRTY DESDFSRLYR TNLNIYGGKT DDDIQDMATL SRLIYGLSSA YLLLGDRRYL DAAAAGVDFQ RTAFRSLSHD GRTIIWSHAR RKLVNGNLTY IPSLMGDDAG TIPLYEQIYA LAGMTQYFRI TGDPEVLDDI MRTVRAFNTF FLDDSAVVPE YPGKKGYFSH IDPATMRADS PALAHNRLRK NWNSIGDHIP AYLVNLILAL DPLPQGAGKD IERFLKKCED MLDLTTDLII EKFPEADCPY VNERFFADWT PDQGWQWQQN RAIVGHNLKI AWNLTRVANY YSYKGQDQKA KRAMQLAEQL GKAMVDAGLD KVRGGCFDAV ERKPKSPGEI QFVWGNHKDF WQQEQNVLAY LILYGYTGTN LYRDLFRDAA AWWNTFQLDR DNRGVFFRVS DNGDPFISGR GMAGFDIAGY HSFELNFLAH IYLRTFVYSG AGVATKDDRS EAGADFCLYF WPAERSQIQS LNVLPDFMSP GVLDITSIKV NGKERKFMAQ EDFQIPLQPD ELGKEIVVSF RSGRLHKQ
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