Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0357 |
Symbol | |
ID | 4460874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 421365 |
End bp | 422867 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639701112 |
Product | ThiJ/PfpI domain-containing protein |
Protein accession | YP_844492 |
Protein GI | 116747805 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.51797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGACA AACCTCTCTC CAACAAGAAG GTGGCGATCC TTGTGGAAAG CCAGTACATC CCGGAGGAAC TTCGCGCCTA CCGCGAGAAA TTCGAAGCAT ACGGGGCGAC GTGTCATTTC GTGTCCCGCC TGTGGGGACA ATCCAGCCAG ACGTTCATCA GCGAGCTCGA GGATCCTCAG GGAACGCCCG AGACGTTCAG GGTGGATATC GATGTGGAAT CCGTCAGACC CGAGGATTAC GCCGCGGTGA TCATGGCGGC CAACTACACG AGTGTGCGGC TGCGCTATTT CAGCCCGCCC CACACCATGC GCGACACCCC GGCCGTGAAG TTCTTCGCCG ATGCTATGCG AAATCCCCGG ATCGTCAAGG GGGCTTTGTG CCACGGTCTT TGGATTCTCA CTCCGACCCC GGAGTTGCTC ACGGGCAGGA AGGTCATTTG TCACGAGGTG GTCGCCTCGG ACATCGTCAA CGCCGGCGCC GTCATCACCC CGTCGACGAG CGGTATCGTG GTCGACCGGG ATCTCGTCAC CGGTCATTCG AAGAACGAGG CGGGAGCGAT GGTGGACGCC ATCAAAGAGC TTCTGACGGC ACCCGCCTTG ATACCCGACC CTCCCCGATT CAGCCTGAGC GACGTGAAGC CGGGAAGACG CCGCGTCCTC GTTCTCCTCT CGGAATTCGG GTACTGGGGA GAAGAACTGG TCGGTCCGGT GGAGGTGTTC GATGCGGCGG GCTACCGGGC GGATTTCCTG ACTCCCACGG GAAAGAGGCC CGTCGCGATC ACGGTGAGCA TGAACCCGGA GTACACCGAT CCGCCGCTGG GGCGGTCCGT TACCTCGAAG GAAGTGGCCG CCAGGACGCG GGAGTGGGAC GATCCCGCCA CGGTGCAGGG CAGGCGGCTG GAAACGCCGC TCAACCTCTC GGAATGGTTT CCGGATCGGC CATATTGGAG CGCGCCGCAG TTCATCCGCG CCATGGAGCA CTACAACCGT GCCCTGGATC GGGCCCGCCG GGAGATCGAG AACTACGATG CGCTCCTTAT CGTGGGGGGC AGCGGCCCCA TCTGCGACCT CGCCAACAAT CACCGGGTCC ACGACCTCAT CCTGGGTTTC CATCGGGCGG ACAAACCCAT CGCGGCGGAG TGCTACGGCG TGGCCTGCCT GGCGTTCGCC CGTGAGCTGG AGGATCGGAA AAGCCTCATT TGGGGAAAAC ATGTGACGGG CCATTGCAAG GAATACGACT ACAAGGACGG CACGGGTTTC ATGAAAGCGA GGGGACAGTT CTACGACATC AACATGGGTC CGCCTCCCTA TCCCCTGGAG TACATCCTCC GTGACGCCAC GGGACCCGAA GGGGGCTTCC ACGGCAACGT CGGCAGGGAG ACCAGCGTCA TCGTGGACTA CCCGTTCATC ACCGGCAGGT CGACCCCGGA TTCCTATCTC ACGGGGCAGA AGCTGGTGGA AGTGCTGGAC GGTGAGCCAC CGCTCCGGCG CTTCGGCTGG TAA
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Protein sequence | MADKPLSNKK VAILVESQYI PEELRAYREK FEAYGATCHF VSRLWGQSSQ TFISELEDPQ GTPETFRVDI DVESVRPEDY AAVIMAANYT SVRLRYFSPP HTMRDTPAVK FFADAMRNPR IVKGALCHGL WILTPTPELL TGRKVICHEV VASDIVNAGA VITPSTSGIV VDRDLVTGHS KNEAGAMVDA IKELLTAPAL IPDPPRFSLS DVKPGRRRVL VLLSEFGYWG EELVGPVEVF DAAGYRADFL TPTGKRPVAI TVSMNPEYTD PPLGRSVTSK EVAARTREWD DPATVQGRRL ETPLNLSEWF PDRPYWSAPQ FIRAMEHYNR ALDRARREIE NYDALLIVGG SGPICDLANN HRVHDLILGF HRADKPIAAE CYGVACLAFA RELEDRKSLI WGKHVTGHCK EYDYKDGTGF MKARGQFYDI NMGPPPYPLE YILRDATGPE GGFHGNVGRE TSVIVDYPFI TGRSTPDSYL TGQKLVEVLD GEPPLRRFGW
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