Gene Sfum_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0357 
Symbol 
ID4460874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp421365 
End bp422867 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content63% 
IMG OID639701112 
ProductThiJ/PfpI domain-containing protein 
Protein accessionYP_844492 
Protein GI116747805 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.51797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACA AACCTCTCTC CAACAAGAAG GTGGCGATCC TTGTGGAAAG CCAGTACATC 
CCGGAGGAAC TTCGCGCCTA CCGCGAGAAA TTCGAAGCAT ACGGGGCGAC GTGTCATTTC
GTGTCCCGCC TGTGGGGACA ATCCAGCCAG ACGTTCATCA GCGAGCTCGA GGATCCTCAG
GGAACGCCCG AGACGTTCAG GGTGGATATC GATGTGGAAT CCGTCAGACC CGAGGATTAC
GCCGCGGTGA TCATGGCGGC CAACTACACG AGTGTGCGGC TGCGCTATTT CAGCCCGCCC
CACACCATGC GCGACACCCC GGCCGTGAAG TTCTTCGCCG ATGCTATGCG AAATCCCCGG
ATCGTCAAGG GGGCTTTGTG CCACGGTCTT TGGATTCTCA CTCCGACCCC GGAGTTGCTC
ACGGGCAGGA AGGTCATTTG TCACGAGGTG GTCGCCTCGG ACATCGTCAA CGCCGGCGCC
GTCATCACCC CGTCGACGAG CGGTATCGTG GTCGACCGGG ATCTCGTCAC CGGTCATTCG
AAGAACGAGG CGGGAGCGAT GGTGGACGCC ATCAAAGAGC TTCTGACGGC ACCCGCCTTG
ATACCCGACC CTCCCCGATT CAGCCTGAGC GACGTGAAGC CGGGAAGACG CCGCGTCCTC
GTTCTCCTCT CGGAATTCGG GTACTGGGGA GAAGAACTGG TCGGTCCGGT GGAGGTGTTC
GATGCGGCGG GCTACCGGGC GGATTTCCTG ACTCCCACGG GAAAGAGGCC CGTCGCGATC
ACGGTGAGCA TGAACCCGGA GTACACCGAT CCGCCGCTGG GGCGGTCCGT TACCTCGAAG
GAAGTGGCCG CCAGGACGCG GGAGTGGGAC GATCCCGCCA CGGTGCAGGG CAGGCGGCTG
GAAACGCCGC TCAACCTCTC GGAATGGTTT CCGGATCGGC CATATTGGAG CGCGCCGCAG
TTCATCCGCG CCATGGAGCA CTACAACCGT GCCCTGGATC GGGCCCGCCG GGAGATCGAG
AACTACGATG CGCTCCTTAT CGTGGGGGGC AGCGGCCCCA TCTGCGACCT CGCCAACAAT
CACCGGGTCC ACGACCTCAT CCTGGGTTTC CATCGGGCGG ACAAACCCAT CGCGGCGGAG
TGCTACGGCG TGGCCTGCCT GGCGTTCGCC CGTGAGCTGG AGGATCGGAA AAGCCTCATT
TGGGGAAAAC ATGTGACGGG CCATTGCAAG GAATACGACT ACAAGGACGG CACGGGTTTC
ATGAAAGCGA GGGGACAGTT CTACGACATC AACATGGGTC CGCCTCCCTA TCCCCTGGAG
TACATCCTCC GTGACGCCAC GGGACCCGAA GGGGGCTTCC ACGGCAACGT CGGCAGGGAG
ACCAGCGTCA TCGTGGACTA CCCGTTCATC ACCGGCAGGT CGACCCCGGA TTCCTATCTC
ACGGGGCAGA AGCTGGTGGA AGTGCTGGAC GGTGAGCCAC CGCTCCGGCG CTTCGGCTGG
TAA
 
Protein sequence
MADKPLSNKK VAILVESQYI PEELRAYREK FEAYGATCHF VSRLWGQSSQ TFISELEDPQ 
GTPETFRVDI DVESVRPEDY AAVIMAANYT SVRLRYFSPP HTMRDTPAVK FFADAMRNPR
IVKGALCHGL WILTPTPELL TGRKVICHEV VASDIVNAGA VITPSTSGIV VDRDLVTGHS
KNEAGAMVDA IKELLTAPAL IPDPPRFSLS DVKPGRRRVL VLLSEFGYWG EELVGPVEVF
DAAGYRADFL TPTGKRPVAI TVSMNPEYTD PPLGRSVTSK EVAARTREWD DPATVQGRRL
ETPLNLSEWF PDRPYWSAPQ FIRAMEHYNR ALDRARREIE NYDALLIVGG SGPICDLANN
HRVHDLILGF HRADKPIAAE CYGVACLAFA RELEDRKSLI WGKHVTGHCK EYDYKDGTGF
MKARGQFYDI NMGPPPYPLE YILRDATGPE GGFHGNVGRE TSVIVDYPFI TGRSTPDSYL
TGQKLVEVLD GEPPLRRFGW