Gene Sfum_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0350 
Symbol 
ID4460711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp413214 
End bp413747 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content60% 
IMG OID639701105 
ProductMucR family transcriptional regulator 
Protein accessionYP_844485 
Protein GI116747798 
COG category[K] Transcription 
COG ID[COG4957] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.705833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA AATTGCTGGA ACTTGCGGTG GAAATAGTCC AGGCACAAGT TTCCATCGGC 
AAGATGACAG GGGAGGAGAT CGAATCGGTT CTGGTCAGGG TATACAATGC GCTGCACCGG
ATGAGGCGCG CCGAGGAGGA AGGGCGTCCG GTGGCCATGG AGGAAATCGG GTACGGAGCC
GCCGACGAAC ACGAACCACC GGGAAAGGGC GATCCGCGCG ACTCGATCCA GGAAGACCAG
GTCATCTGCA TGGAATGCGG CTCTCAGTTC CGGCAACTCA CCGCCAACCA CCTGCGCACG
CATCAACTGA CGCCCCGCGA ATACAAACGC AAGTGGGGGT TCCCGCTCAA GCAGCCGCTG
GCTGCCCGTG TACTGACGAA GTTGCGCAGC CGTTCCGCAA AGAAGCGGGG TCTGCCCCAG
AAATTGCAGC AGTACCTGGA AGACCAGCGG CGCAGAAAAG GCCTCGCCAC CCCCGAAATG
CACGAAACAA CCAAGCGCAG GCCGGGAAAG TCGGTGAAAA CCGGCAGTGC GTAG
 
Protein sequence
MDKKLLELAV EIVQAQVSIG KMTGEEIESV LVRVYNALHR MRRAEEEGRP VAMEEIGYGA 
ADEHEPPGKG DPRDSIQEDQ VICMECGSQF RQLTANHLRT HQLTPREYKR KWGFPLKQPL
AARVLTKLRS RSAKKRGLPQ KLQQYLEDQR RRKGLATPEM HETTKRRPGK SVKTGSA