| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0347 |
|---|
| Symbol | |
|---|
| ID | 4460708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 410877 |
|---|
| End bp | 411689 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639701102 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_844482 |
|---|
| Protein GI | 116747795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02757] conserved hypothetical protein TIGR02757 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.222932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGGC AATACATCGT TCGCGGTTCC CTGCATTTGG GCCGCCTGTC GGAGTCGAAA
CCCGGGAAGG CCGCATTTGA CGAACTGTAC GATCGTTTCA ACCGGCGGGA GTACGTCCAT
CCCGACCCGG TGGAATTTCT TCATGAGTAT GACGATCCGC GGGACCGGGA AGTGGTGGGA
ATCGTTGCGT CCGCGCTCGC TTATGGCCGG GTGAGGCAGA TACTCGGGAG CGTTGCCGAG
GCGCTTCGGA GGATGGGGGC CTCTCCCGCG GATTTCGTGC GATCGAGTTC CCCGGGGTTA
ATCAGGAACG TTTTTGAGGG CTTCAAACAC CGTTTCACCA CCGGGCATGA AGTCGCCTCG
ATGCTGATCG GGGTGAAAAG GATGCTGGAA CGTCACGGTT CCCTGGAGGA CTGTTTTGCC
TCTTTTCGCA AGAATGCCGA TGAGACGGTC CTTCCGGCCC TGTGTGCTTT CGTCGGCGAA
CTGGACGGTT CCCCCGGGTC GCGGAGCATG TTCCTGCCTT CTCCCGCAAG AGGGAGCGCC
TGCAAGCGTT TCAACCTGTT CTTGCGCTGG ATGATCCGCC GCGACGAGGT GGATCCGGGA
ATATGGACTG CCGTACCCGC TTCCCAACTG GTGGTTCCCG TGGACACTCA CATGCACCGC
ATCGGACGCG CACTTGGCTT CACCGTGCGA AACGGCGCGG ATCTCAGGAC CGCTCTCGAA
ATAACGGACG CTTTCAGAAC CATCTGCCCG AGCGATCCGG TACGATACGA TTTCGCATTG
ACACGGATCG GGATTCTCAA CGAGAACTCC TGA
|
|---|
| Protein sequence | MSRQYIVRGS LHLGRLSESK PGKAAFDELY DRFNRREYVH PDPVEFLHEY DDPRDREVVG
IVASALAYGR VRQILGSVAE ALRRMGASPA DFVRSSSPGL IRNVFEGFKH RFTTGHEVAS
MLIGVKRMLE RHGSLEDCFA SFRKNADETV LPALCAFVGE LDGSPGSRSM FLPSPARGSA
CKRFNLFLRW MIRRDEVDPG IWTAVPASQL VVPVDTHMHR IGRALGFTVR NGADLRTALE
ITDAFRTICP SDPVRYDFAL TRIGILNENS
|
|---|
| |