Gene Sfum_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0346 
Symbol 
ID4460707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp409211 
End bp410356 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content64% 
IMG OID639701101 
Producttetraacyldisaccharide 4'-kinase 
Protein accessionYP_844481 
Protein GI116747794 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1663] Tetraacyldisaccharide-1-P 4'-kinase 
TIGRFAM ID[TIGR00682] tetraacyldisaccharide 4'-kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.328833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGT CAATCATCCT CGGCACGGGG CGTTTTCAGG CCATCAGACG GCTTTCGGCC 
CGCGTGCGGC GACTGTGGTA CTCGGCCCCC GAGACCCTTC GCGGAGGTCC CCTGCTTTCC
GCCATCAAGC TGACTTCCAT GACTTACCGG GCAGGCTTCG AGATGGACCG GCGGCGATCC
CGTTTCCGCC GACGCCGCCT GCCCGCATAC GTCGTCAGCG TGGGGAACCT GGCCGTGGGA
GGAACCGGCA AGACGCCCCT TACCCTGTGG CTCGCCCGAT ATTTCAAGAA CGGGGGCCGT
AGAGTCGCGG TGCTCAGCAG AGGATACGGG AGAAGCGGGA GCGCCCCGGG CCGCGTGCCT
TCCTCGGGCG AGTTGTCCGT CCTGGCGCTC GAGTACGGCG ACGAACCGGC CATGCTGGCA
CTCGAACTGG GAGACACGCC GGTATATGTC GGAAAGCACC GATGGGAATC CGGAATCCTT
GCGATCGAAT CTTCCCGGGC GGATCTCGTC ATTCTTGACG ACGGCTTTCA ACATCATGCG
CTCGAACGGG ATCTCGATCT CGTCCTGCTG GATGCGTCAA ATCCCTTCGG AAACGGTTTC
ACGCTGCCCC TGGGACCATT GCGCGAACCC AAGGCACACT TGGCGCGTGC GCACGCCATC
GTCCTGACTC GAGCCGTCGA ACCGGAGTCT GTCGCGCGCA CTCGCGCGCA ACTCGACAAA
GCCTTTCCCG ACAAGCCGGT ATTTGCGGCA CAGCACATAC TGAGGGGGTT CCACGCGGGT
CTGGGGGGAG CCGTCGTTCC CTTGAGGAGC ATGGTCGCAC GGCCTGCCGT GGCTTTTGCG
GGGATCGCCG ACCCCAAGTC CTTCTTTTCT CTGCTCGAAG CGCTGGAGAT CGACCTGCGC
ATGGCGTTCG CCTTTCCGGA CCATCACCGG CCGACGGCCC GCGATACCGC CGCCCTGTTC
GACGCAGTCC GTGCCTGTTC GGCTGACTTG CTCATCACCA CTCAAAAGGA CGCCGTTCGG
CTTCCCGGAT TTCTGCGGCG CGTGGTGTGC GTGCCCGACC TGGAAATCGA CTTTGGAGAG
GACGAGACGC GCTTCCGCCG GTTCCTGGAT CGGGAGACCC GTGGACGGCA AGCGATGCCC
GAATGA
 
Protein sequence
MQTSIILGTG RFQAIRRLSA RVRRLWYSAP ETLRGGPLLS AIKLTSMTYR AGFEMDRRRS 
RFRRRRLPAY VVSVGNLAVG GTGKTPLTLW LARYFKNGGR RVAVLSRGYG RSGSAPGRVP
SSGELSVLAL EYGDEPAMLA LELGDTPVYV GKHRWESGIL AIESSRADLV ILDDGFQHHA
LERDLDLVLL DASNPFGNGF TLPLGPLREP KAHLARAHAI VLTRAVEPES VARTRAQLDK
AFPDKPVFAA QHILRGFHAG LGGAVVPLRS MVARPAVAFA GIADPKSFFS LLEALEIDLR
MAFAFPDHHR PTARDTAALF DAVRACSADL LITTQKDAVR LPGFLRRVVC VPDLEIDFGE
DETRFRRFLD RETRGRQAMP E