Gene Sfum_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0343 
Symbol 
ID4460704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp403852 
End bp406767 
Gene Length2916 bp 
Protein Length971 aa 
Translation table11 
GC content66% 
IMG OID639701098 
ProductDnaK-related protein 
Protein accessionYP_844478 
Protein GI116747791 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.87364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA ATGCGTCCAT GGAAGCGGAA ACGCCTTCCT TTCAATATAT CATCGGAATC 
GATCTCGGGA CCACGAATTC GGCTGTGGGC TACGTGGACC TGTCGGCGAG CGGGGCAGAC
GACGCTGCCG TTCGTTTTCT CGAGATACCT CAGTTGGTTG CACCTGGAGA ACTCGGCAAC
CGTCCGGTAT TGCCTTCCTT TCTTTATCTT CCGGGCCCCT ACGAGCTTCC CCCCGGGAGT
ACGGCCCTGC CGTGGGCGCC TGAGCGTTCT TACGCGGTGG GCGAATTCGC ACGCGAACAG
GGAGCCCTTG TGCCCGGCCG CCTTGTCTCT TCCGCCAAGT CATGGTTGTG CCACGGCGGG
GTGGACCGCA CCCATGCGAT TCTGCCCTGG GGCGCGGCCG AAAACCTCGA CCGCATCTCG
CCCATCGAGG CGAGCTCTCG AATCCTGCTC CACATCCGGG AGGCATGGAA CGAGGTCATG
GCGCATGGGC GCGAGGAGCA CTTCCTGGAA GAACAGCTGG TCGTATTGAC CGTCCCCGCG
TCCTTCGATG AGGTCGCCCG CGAGCTCACG GTTCGGGCGG CCCATGAGGC GGGGATTCGC
CGGATCGTGC TGATCGAAGA GCCTCTTGCG GCCTTCTATG CCTGGCTGTG GAAGCACGAG
GCGGACTGGC GCACCCTGAT GCGCCCGGGC CAGTTGATCC TGGTCTGCGA CGTGGGAGGC
GGGACTTCGG ACTTCACCGT GATCGCCATC CGCGAAGACG CGCTGGGATT GCGGCTCGAC
CGGCTGGCCG TGGGAGAGCA CCTCATGCTG GGCGGCGACA ACATGGACCT TGCCTTGGCG
CGACATGTCG AGGAAGTCAT GCAGGGCGGC ACGGGACGGC TCGATTCGAG AAGGTGGCAG
CAGTTGTGGC ACCATTGCCG GAAAGCCAAG GAGACGCTGC TCGGAACGGT TGAGAGCGCC
GGCCCGCCCG CCGGACGGCC AAGCGCCCCC GATTCCGTGG ACCTCACCAT CGTCGGTTCC
GGAGGCAGGC TCATCGCCGG GACCCTCACG GCCACTCTCA GCCGGGAAAC GGTGAAGGAG
CTGACCCTCG ACGGTTTCTT TCCGTTCACA AACTTGGACG ATGTTTCGCC GCCGGCCGCC
GGGGCGGTTT TGTCCGAAGG GGGACTCCCC TATGTCGGCG ACCCGGCCGT GACGCGTCAC
ATGGCGGCAT TCTGGCGGCG GCACCGCCCG CTTCTGCTCC GGGAAACGGG ACGCAGCCGG
CTCTATCCCG ATTTCCTGCT TTTCAACGGC GGAGCATTGA TCCCGGAGAC CATCCGGGAC
CGCCTGCTGC GCGTCGTTCG GGAGTGGTTC AGAGCGGAAG CCGGCGATGA ATGGTCGCCC
GTCGAGCTGG AAAACCCGCG ACCCGACCTG TCCGTGGCGA TCGGAGCGGC CTATTACGGC
CGGGTAAGAT TGGGGCGGGG AGTCCGGGTC GGGGCGGGAA GTCCGCGCAC GTTCTACGTC
GAGGTCGCCC CGCCAGGGGA CCGGACGGTG GAGGAAGGAC ACCGCACCGC CGTGTGCCTG
TTGCCGAGAG GCGCGGAGGA AGGGTACGAA GCCGAGCTTG AACGGCCCGA ATTCCAGGTG
CGCACCAATC AACCGGTTTC CTTCGGGGTG CTGGCTTCGA GCACCCGCAT CGGAGACAGC
CCCGGCGAAA TCCTGTCCCT GCCGAATCAT GAGCTCACGG TGCTGCCTCC CATACGCACC
GCGCTGAGGT ACGGACGGAA AGGCTCAGCG GCAGCACTTC CGGTGCGCCT TGCGGTTCAT
CTCACCGATA TCGGCACCCT GGAGCTTTGG TGCCGTTCGA CATCGGGTCC TCACCGCTGG
CAGCTTCAGT TCGACGTCCG GCACAACGCC GAGGATGAAA CCCGGCCGTC GCCGGCCGGG
GAGACATTCG AGGCGGGCCG CATCGACGAG GCCGGGGCAG CGATTGCCGC GGTTTTCCGA
AGGAGCGCCG GGAGGACTCT GCGCCCTCCC GAACGGCTGG TGAAGGACTT GGTGGAGATC
TTCGAAGTGA AGCGGGAGAG ATGGCCCGCA TCGCTCGTTC GCAAGCTGGC CGACGCCTTG
CTCGAAGACC GGGAGGGGCG TTCCCTGACC GCGCAGCACG AAGCGCGCTG GTTGAACCTG
CTTGGGTTCT GCCTGCGTCC CGGATACGGC GACCCGCTCG ACGAGTGGCG CGCAAAGGAA
GCCTGGAAGC TGTATCCCGC GGGACTGAGC TTCGCTCGGC AACCACAGAA CCGCTCCGAA
TGGTGGATCT TCTGGAGACG GGCGGCCGGG GGCCTCAGCG CCGGCCAACA ACAGCGCATC
TGCCAGGAGG TGCTCCCCGG GCTCCAACTC GAGGAGCAAC GGAAAAAGGG GACCACGCGC
AAAGGAGGCG CTCCCCGGAC GGTCCAGGAA GAACTCGAGA CCTGGATGAT GCTTGCAAAC
CTCGAACGGC TGCCGGCCGC CGTCAAGACA AGCCTCGGGC GTCTCATGCT GCGACGGCTC
CAACGAGGCG CCCCTCGGCC CCAGGAACTC TGGACGTTCG CCCGGTTCGG GGCACGCGTC
CCGTTCTACG GTCCTCTGGA TCAAACCGTG CCCCGCGAAG AAGCGGCTCT CTGGCTGGCC
GCCCTCCTCG ACCTGGACCT CGAGCCCACC CAGCCCCTTG CCCGAACCCT GGTCTCCCTT
TCGAGGCTCA CGGGCGACCG AGCCCGGGAC CTCGATCGCG CGGACCGCGA CAGAGTACTC
CGCCGTCTCG AGTCGATTCC CGGGACGAGC CACTTGCGCG CGCTCGTCAA CGATGCCCGT
ACGGACCTCG AGGGAACGGA GCGTGAATGG CTCTACGGCG AATCGCTGCC TTCGGGGCTC
ATCGTGGTGG AGGGGGCGGA GACGGTCGAG CCGTGA
 
Protein sequence
MTANASMEAE TPSFQYIIGI DLGTTNSAVG YVDLSASGAD DAAVRFLEIP QLVAPGELGN 
RPVLPSFLYL PGPYELPPGS TALPWAPERS YAVGEFAREQ GALVPGRLVS SAKSWLCHGG
VDRTHAILPW GAAENLDRIS PIEASSRILL HIREAWNEVM AHGREEHFLE EQLVVLTVPA
SFDEVARELT VRAAHEAGIR RIVLIEEPLA AFYAWLWKHE ADWRTLMRPG QLILVCDVGG
GTSDFTVIAI REDALGLRLD RLAVGEHLML GGDNMDLALA RHVEEVMQGG TGRLDSRRWQ
QLWHHCRKAK ETLLGTVESA GPPAGRPSAP DSVDLTIVGS GGRLIAGTLT ATLSRETVKE
LTLDGFFPFT NLDDVSPPAA GAVLSEGGLP YVGDPAVTRH MAAFWRRHRP LLLRETGRSR
LYPDFLLFNG GALIPETIRD RLLRVVREWF RAEAGDEWSP VELENPRPDL SVAIGAAYYG
RVRLGRGVRV GAGSPRTFYV EVAPPGDRTV EEGHRTAVCL LPRGAEEGYE AELERPEFQV
RTNQPVSFGV LASSTRIGDS PGEILSLPNH ELTVLPPIRT ALRYGRKGSA AALPVRLAVH
LTDIGTLELW CRSTSGPHRW QLQFDVRHNA EDETRPSPAG ETFEAGRIDE AGAAIAAVFR
RSAGRTLRPP ERLVKDLVEI FEVKRERWPA SLVRKLADAL LEDREGRSLT AQHEARWLNL
LGFCLRPGYG DPLDEWRAKE AWKLYPAGLS FARQPQNRSE WWIFWRRAAG GLSAGQQQRI
CQEVLPGLQL EEQRKKGTTR KGGAPRTVQE ELETWMMLAN LERLPAAVKT SLGRLMLRRL
QRGAPRPQEL WTFARFGARV PFYGPLDQTV PREEAALWLA ALLDLDLEPT QPLARTLVSL
SRLTGDRARD LDRADRDRVL RRLESIPGTS HLRALVNDAR TDLEGTEREW LYGESLPSGL
IVVEGAETVE P