| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0323 |
|---|
| Symbol | |
|---|
| ID | 4460960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 387698 |
|---|
| End bp | 388759 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639701077 |
|---|
| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| Protein accession | YP_844458 |
|---|
| Protein GI | 116747771 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.79977 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.360385 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAGC TTGATCGTTT GTTGGAACGC ATCGAGCCGG CCTCCAAGGA TTGGGAGGCG
AAGGCATGGG AAAGACTGCA CGCTCAGATT CGGCCGCGCG ATTCGCTGGG ACGGCTTGAG
GTCATCGCGG CGCGACTGGC GGCGATCAAA CGGAGCCTCA CTCCCGCGGT GGGCAGGAAG
ATCATCTTCA CCATGGCCGG CGACCACGGC GTGGCCGCGG AAGGGGTCAG CGCCTATCCG
CAGGAAGTGA CCGCGCAGAT GGTGGGCAGC TTCGTGCGCG GGTGGGCGTC GATCAACATC
CTGGCGGTCC ACTGCGGCGC GGCCGTGCGG GTGGTGGATT GCGGCGTCGC ATCGGATCTG
CCTCCGGACT GGCCTGTTTT GCGCCGTAAA CTGGGCAAAG GCACCGCAAA CATCGCCGTG
GGCCCCGCCA TGAGCAGGGA GGTGGCGGTC CGGGGTCTGA CGATCGGTGC GGAAATCGTG
CAGGACGCGC ACCTGAAGGA GGGGTATCTC CTGTTCGGCA CGGGGGACAT GGGGATTGGT
AACACCACGC CGTCGACGGC CATCATCGCG GCTCTTGGCG GCAAGCCCGT GCGGGATCTC
ACCGGCAGGG GGACCGGCAT CGACGACGTC GCGTTCGAGC GGAAGGTCCG AGTGATTGAA
AGGGCGCTCG CAGTGAACAG GCCCGACCCG AATGATCCCC TGGGCGTGCT CGCCGGAGTG
GGAGGGTTTG AGATCGCCGC CTTGGGCGGC GCCGTTCTGG GTGCGGCGGC ACTCCGCGTT
CCGATCATCT GCGACGGGTT CATCGCCACC GCCGGGGCGC TTGTCGCATG CAGGCTCGCG
CCGAAAGCCG CAGACTACCT TTTTGTGTCG CATCGGAGCC GGGAGGTCGG ACACACCGCC
ATGGTGGACA TGCTGGGCAT GCGCCCGATA CTCGATCTGG ACATGAGACT GGGGGAAGGC
ACGGGGTCCG CGCTGGCAAT GAACATCGTG GAAGCGGCGG CGAAAGTGCT CGTTGAGTGC
AAGACCTTCG AAGAAGCGGG AGTGACGGAC ACGGGGCACT GA
|
|---|
| Protein sequence | MEKLDRLLER IEPASKDWEA KAWERLHAQI RPRDSLGRLE VIAARLAAIK RSLTPAVGRK
IIFTMAGDHG VAAEGVSAYP QEVTAQMVGS FVRGWASINI LAVHCGAAVR VVDCGVASDL
PPDWPVLRRK LGKGTANIAV GPAMSREVAV RGLTIGAEIV QDAHLKEGYL LFGTGDMGIG
NTTPSTAIIA ALGGKPVRDL TGRGTGIDDV AFERKVRVIE RALAVNRPDP NDPLGVLAGV
GGFEIAALGG AVLGAAALRV PIICDGFIAT AGALVACRLA PKAADYLFVS HRSREVGHTA
MVDMLGMRPI LDLDMRLGEG TGSALAMNIV EAAAKVLVEC KTFEEAGVTD TGH
|
|---|
| |