Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0314 |
Symbol | |
ID | 4461665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 376540 |
End bp | 377733 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639701069 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_844450 |
Protein GI | 116747763 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.568066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.496718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCA TGGTGTCGGC TATTGTGACT TTGTCTTTTG CACTCGCGTT CCTGGTCCTG CCGGCTTTCG CTCAGGAAAC CGTCAAGGTG GGCATCATTC TGCCGGTCAC GGGAGAAAAG GCGAAATTCG GCGAAATCGA GAAGAAGTCT TTCGAGATGG CCCTGGAGGA GATCAACGCA GCGGGGGGCA TCAACGGGAA GAAGCTCGAA TTCCTGCTTG AAGACGACAC CGGACGCCCG GATGTGGCTC GTTCGGCGGC CGAGAAGCTC ATCACCAAGG ACAAGGTGGT CATGCTCGGC GGCGGATACG GGAGTTCCGA GACGTTTGCC ATTGCCGGCG TTGCGCAACA GAGCCGCATC CCTTTCCTCG TCAACACGGG ATCGGACGAT AAGATCACGG AAAAGAAATG GGAATACATC TTCCGCCTGA ACCCCCCCGT GAGTGAGTAT CCGAAGGGGC TCGAATCCTT CCTCACCGAG GTGGTGAAAC CGAAGACGGC GGTCATTTTG TACGAAAACA CCAACTTCGG GTCCTCGGGG TCCAAGGAGT TCAAGGCGAC CTGCGAACGG CTGGGCATCA AGGTGCTCAT GATGGAAGGC TACGAACACG GCGGAGTGGA TTTCAAGCCC CTGCTGATCA AGGTCAAGCA GGCCAATCCG GATCTCGTTT ACATGATTTC CTACCTCATG GACGCGTCGC TGCTCATGAG GCAATCCCTG GAGCTTCGCG TCACGCCCAA GCTCTTCGTC GGGGGGGCGG CGGGTTTTAC GCTGCCCGAA TTTCAGAAGA ATGCGGGCAA GGCCTCCGAC ATGGTCTACT CCGCGACCCT GTGGTACCAG ACCCTGCCCT ACCCGGGAGC CAAGAAATAC TTCGACGATT TCAAGAAAAA ATTCGGGGTT GATACGGAAT ATCACGGTGC CGAGGCCTAT GCCGCGGCTT TCGTGATCGC CGATGCACTG AAACGGACCA AATCCATGGG TCCGGAAGAT GTCCGCCAGG CGCTGGCCGC CACCGACATG ATGACGGTTT TCGGCCCCGT CAAGTTCATC GCTTACGACA CGATGACCAA CCAGAACAAA CTGCCCACCT ACCTGGTGCA GTGGATCGAC GGGAAGCTCG AGCTGGTGTG GCCGAAGGAC GTCGCCTCCA AACCATACGT GTATCCTATC GACTGGGAAA AGGTCTGGAA ATAG
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Protein sequence | MKRMVSAIVT LSFALAFLVL PAFAQETVKV GIILPVTGEK AKFGEIEKKS FEMALEEINA AGGINGKKLE FLLEDDTGRP DVARSAAEKL ITKDKVVMLG GGYGSSETFA IAGVAQQSRI PFLVNTGSDD KITEKKWEYI FRLNPPVSEY PKGLESFLTE VVKPKTAVIL YENTNFGSSG SKEFKATCER LGIKVLMMEG YEHGGVDFKP LLIKVKQANP DLVYMISYLM DASLLMRQSL ELRVTPKLFV GGAAGFTLPE FQKNAGKASD MVYSATLWYQ TLPYPGAKKY FDDFKKKFGV DTEYHGAEAY AAAFVIADAL KRTKSMGPED VRQALAATDM MTVFGPVKFI AYDTMTNQNK LPTYLVQWID GKLELVWPKD VASKPYVYPI DWEKVWK
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