Gene Sfum_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0309 
Symbol 
ID4461660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp372314 
End bp373006 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content56% 
IMG OID639701064 
ProductCBS domain-containing protein 
Protein accessionYP_844445 
Protein GI116747758 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.349467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.455645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTTA AGAATTGGAT GAGCAAGACG GTGGTCACCA TTGAAGAAGA TGATTCGATG 
CAACATGCCA TGAGCCTGAT GAAGGAACAC AAGATCCGCA TGCTGCCGGT GGTTGCCAGG
GGGAAGCTGG TCGGCGTGGT GTCCGACACG GACCTCAAGC GGGCTTCGGC CTCCGATGCC
ACGACCCTGG ACATGCACGA ACTGCTCTAC CTTATTTCCA AGATCAAGGT CCAGGACATC
ATGACCAAGA CTCCCATCAC CGTCTCGCAA AACTTCACCG TGGAAGAGAC CGCGGAACTG
CTGATGAGGA AGAAGATCTC GGGCTGTCCC GTGTTGGATG ACGACGGACT GGTGGTCGGG
GTCATCACGC GCGACGATCT TTTCAAGGTC CTGATCATGC TGAGCGGGCT CGGCAAAAAG
GGCATCCAAC TGGCTTTCCA GGTGGAGGAC CGTTCCGGCT CGATCAAGAA CATCACGGAC
GTTATCCGCA AGTACGACGG TCGGATCGCG AGCATCCTGA GCTCGTATGA ATATGCGGCG
CCCGGCCATC GCATCGTATA CATCAGGACC TACGATATAG ACCGCGCCGT CCTACCGAAG
CTGGTCGAGG AACTGAAGCA AGTTGCCATG CTGATCTACA TCGTGGACCA CCGCGACAAC
AAGCGGGAAA TATTCCACGA CCTGGTGGCA TGA
 
Protein sequence
MLVKNWMSKT VVTIEEDDSM QHAMSLMKEH KIRMLPVVAR GKLVGVVSDT DLKRASASDA 
TTLDMHELLY LISKIKVQDI MTKTPITVSQ NFTVEETAEL LMRKKISGCP VLDDDGLVVG
VITRDDLFKV LIMLSGLGKK GIQLAFQVED RSGSIKNITD VIRKYDGRIA SILSSYEYAA
PGHRIVYIRT YDIDRAVLPK LVEELKQVAM LIYIVDHRDN KREIFHDLVA