| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0308 |
|---|
| Symbol | |
|---|
| ID | 4461659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 370998 |
|---|
| End bp | 372281 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639701063 |
|---|
| Product | polynucleotide adenylyltransferase region |
|---|
| Protein accession | YP_844444 |
|---|
| Protein GI | 116747757 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.467855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGAAA AGGTCGGATT CGACATTGTG CCTCCGGATG TCATGGCGAT GATGGGCATC
CTGTCGGACG CCGGCCATGG CGTTTGGCTG GTGGGCGGCG CGTTGCGCGA CCACTTTCTG
GGGCAGGCGC CCAGGGACTT CGATCTGGCG ACGGACGCCT CGGCCGATGA AGTGGTGAGA
CTCTTCCCGA GGGTCATTCC CATCGGAATT CGGCATGGGA CGGTCCAGGT CCACACCAGG
ACCAGGGACG TCGAGGTCAC CAGCACTCCG GGAAGCGGAC TGGAAGGGAT TCTAGAAGAT
CTCGGCCGGC GGGACTTCAC AATCAACGCC CTGGCGTTGT CGTACCCGGA AGGATCGTTC
CTTGATCCTC ACGGCGGGTG CAACGACGCC GACGCCCGGA TACTTCGCGC CGTGGGGGAT
GCGGGCCGTC GTTTTCGCGA GGACCCGCTG AGGGTGCTGC GAGTCTTCCG GTTCGTCAGT
GAGCTCGGGC TTGACGTCGA GCCGGGAACC TGTGCCGCGG CCCGCTCCGA GGCGAACGGT
CTCGCCGCGG TTGCGGGGGA GAGGGTACGC GAGGAGGTCT TCAGGATCCT TTCGGGCGGG
AACGCCGTGA GTGCCCTCCG GCTTATGGAG GAAAGCCGCG TGTTGCGAAC GGTTTTGCCC
GAGCTCCACG AGAGCGGGTG CAGTCACGCC ATCGACACGA TGGGACGATG TCCGAACCGG
TTGAGGATCA GGATGGCCGC GTTGCTCCAC GGCCTGGTGG AGGAAGAAGC CTCCCTTGGA
GCCGTCTCTC CATGCGGGCG CTGCGTTTCA AGCCGCAGGG CCGAAGAGGT GATGGTGCGG
TGGCGGCTGT CGCGCAGGCA AATTCAGGGT GTTCTCGGCA TTCTGGAGAA CCCGCTTCCG
GGCGACTCGG CGAATTGGAC TGACGCGGAT TTGCGACGCT TCATAGCGCG GACCGGTCCG
GAATTTGCCG GGGATGTCCT GGAGCTTGCC CGGGCCTGTC GCGCCGCGGG CGGCGATTCC
GCCGGCGCGG AGCAACTGAG CGGCCTGTAC CGGCGCTATC GCGGGGAAGT GGAGTTGCGT
CCCGTTCCGA GGCTGAGGGA CCTTCCCATA ACCGGTGAAG ACGTCATGCG CATCACCGGG
CTCAAACCCG GTCCACGCGT GGGAAAAATT CTCGAAAGGG CTCACCTGGA AGTTATCGAG
AATCCATTTA TGAATGAAAG AAAAATTCTT ATGGATTTTA TCCGAAAAGA ATTCCATAAA
GAGGCAGAAA TCGAAACGTC GTGA
|
|---|
| Protein sequence | MREKVGFDIV PPDVMAMMGI LSDAGHGVWL VGGALRDHFL GQAPRDFDLA TDASADEVVR
LFPRVIPIGI RHGTVQVHTR TRDVEVTSTP GSGLEGILED LGRRDFTINA LALSYPEGSF
LDPHGGCNDA DARILRAVGD AGRRFREDPL RVLRVFRFVS ELGLDVEPGT CAAARSEANG
LAAVAGERVR EEVFRILSGG NAVSALRLME ESRVLRTVLP ELHESGCSHA IDTMGRCPNR
LRIRMAALLH GLVEEEASLG AVSPCGRCVS SRRAEEVMVR WRLSRRQIQG VLGILENPLP
GDSANWTDAD LRRFIARTGP EFAGDVLELA RACRAAGGDS AGAEQLSGLY RRYRGEVELR
PVPRLRDLPI TGEDVMRITG LKPGPRVGKI LERAHLEVIE NPFMNERKIL MDFIRKEFHK
EAEIETS
|
|---|
| |