Gene Sfum_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0301 
Symbol 
ID4460903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp362784 
End bp363833 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content66% 
IMG OID639701056 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 
Protein accessionYP_844437 
Protein GI116747750 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.494637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCA ATGAAGCCCT GGCCGAAGCG GCCCTGCGGG CTGGGTGCCG GTACTACTTC 
GGATACCCCA TAACGCCTCA GACCGAGCTC ATGGAATACA TGGCCCGCCG CCTGCCCGAG
ATCGGCGGGA CCTTCCTGCA GGCGGAGAGC GAGGTGGCGG CCGTGAACAT GGTCTACGGG
GCTGCGGGCG CGGGAGCCCG CGTAATGACC TCTTCCTCCG GGCCGGGAAT CAGCCTGAAG
CAGGAAGGGA TTTCCTTCCT GGCGTCGGCC GAGCTGCCCT GCGTGATTGT GAACGTCATG
CGGGGCGGGC CCGGGCTCGG CACCATTCAG CCGTCGCAGG GAGACTATTT CCAGGCGACC
CGGGGCGGCG GCCACGGCGA CTACCGGGTG CCGGTCCTGG CGCCGTCCTC CGTCCAGGAA
ACGGCCGATC TCGTTTTTGA ATCCTTCGAC CTGGCCGAAC AATACCGTAC CCCCGTGCTG
CTGCTCACCG ACGGCGTGCT CGGCCAGATG ATGGAACCGT TGCGGTTACC CGAAGTGCGC
ACTCCGCGCA CTTCACGCGC GCCGTGGATC ACGGACGGCT GCAAGGGACG TCAGAGGCGG
ATCGTCAAGA CCCTTTACCT CGACCCCCGC GCCCTGGAGG CGCACAACCT TCACCTTCAG
GCCAAATACG CGCAACTCGC GCGCGAAGAG GTCAGGTCCG AGGTCTATGG CATCGACGGC
GGCATGGACG TATTGATTGT GGCTTTTGGG ATCTGCGCTC GAGCGGCCCG CACCGCCGTG
GACAACCTGA GGGAGAAGGG CTTGCGGGCG GGGCTGTTTC GCCCGGTTAC CCTGTGGCCT
TTTCCCGGTG CCGCCCTGGA AGCCGCCGCC CTGGCGGCAA GGCACGTCCT CACCGTGGAG
TTGAACGCCG GCCAGATGGT TGAGGACGTG CGGCTGGCGC TGTCGGGGCG GGAGATCGCC
TTCCATGGGC GCATGGGAGG CATCATGATC ACGGCTTCGG AAATCGAGGC CGAGGTCCAA
CGGATCAGCG AAGGGAGTGA GGCAGCATGA
 
Protein sequence
MKGNEALAEA ALRAGCRYYF GYPITPQTEL MEYMARRLPE IGGTFLQAES EVAAVNMVYG 
AAGAGARVMT SSSGPGISLK QEGISFLASA ELPCVIVNVM RGGPGLGTIQ PSQGDYFQAT
RGGGHGDYRV PVLAPSSVQE TADLVFESFD LAEQYRTPVL LLTDGVLGQM MEPLRLPEVR
TPRTSRAPWI TDGCKGRQRR IVKTLYLDPR ALEAHNLHLQ AKYAQLAREE VRSEVYGIDG
GMDVLIVAFG ICARAARTAV DNLREKGLRA GLFRPVTLWP FPGAALEAAA LAARHVLTVE
LNAGQMVEDV RLALSGREIA FHGRMGGIMI TASEIEAEVQ RISEGSEAA