Gene Sfum_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0297 
Symbol 
ID4460899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp358325 
End bp359821 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content64% 
IMG OID639701052 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_844433 
Protein GI116747746 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.292337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATAC TTCTCGCCGC ACAGGCTGCA CGGTACTCCG ACCGGGATGC AATTTCGACC 
CCGGAGGGTG TTTTTTCGTA CCGCCGACTC CTCGACGCAT CGGCGAGGGT TGCATCCTTT
CTGTTGGGCG GCTCTTCCGA TCTGGAGGAA AAACCGGTGG CCTTCCTGGC GCCTCCGGGG
TTCCACTATG TTGCGGTGCA GTGGGGTATC TGGCGCGCCG GAGGCATCGC CATGCCGCTG
TCCCTGTTCC ATCCCCGCCC GGAACTGGAA TACGTGCTCG ACGATACGCA CCCTGCCGCG
GTCATCGCTC ACCCGCAACT CGCGGCGGTC CTGAAGCCCC TCTCGGAGGA CCTGCGCTTG
AGGTTCGCCT TGAGCACCGA GGCGCTGGAG CACGCTCCGG GAGTCCTTCC GACGATCGTC
GCGGACCGGC GGGCCATGAT TCTCTATACG AGCGGCACCA CGGGCAGGCC CAAGGGAGTG
GTGACGACGC ATGCAAACCT TGCGGCCCAG GTGACCAGCC TGGTCCTGGC CTGGGGATGG
ACGTCCGAGG ATCGCATCCT GAACGTTCTG CCGCTGCATC ACGTTCACGG AATAGTGAAC
GTGCTCGCCT GCGCCCTCCG GGTCGGAGCG GTCTGCGAAA TCCTGCCCCG GTTCGATCCG
GCCGAGGTAT GGGGCCGCTT CTTGCGAGGC GGGCTCACCC TGTTCATGGC GGTGCCGACG
ATTTATGTGA AGCTCATCGA TCACTGGGAA AAGTCGTCGC CCGCGGACCG GGAACGCATG
TCCGAAGCCT GCCGCGGGAT GCGGCTCATG GTGTCCGGTT CCGCGGCGCT TCCGGTCGGC
ACCCTGGAGC AGTGGCGGCG CATATCCGGC CACGTGCTGC TGGAAAGATA CGGAATGACC
GAGATCGGGA TGGCTCTGTC CAATCCTTTG GAGGGGAGGC GTATACCCGG TTCCGTGGGG
AGCCCGCTCC CCGGCGTGGA GGTGAGGCTG ACGGACGAAT CCGGCAAACC GGTCGCGATC
GGCACTCCCG GCGAGATCGA AGTTCGCGGC CCCACGGTGT TTCTCGAATA TTGGAACCGA
TCCGAGGATA CTCTCAAGGC GTTCAGGGAC GGATGGTTCC TCACGGGGGA CATCGCCGTC
GAAGAACACG GCACGTACCG CATTCTCGGG CGCAACAGCG TGGATATTCT CAAGACCGGC
GGGTACAAGG TTTCGGCGCT TGAAATCGAA GAGACCGTGA GAACGCATCC GGACATCCGG
GAATGCGCCG TGGTGGGGGT TCCGGACCCC GTTTGGGGCG ATCGCGTGTG CGCCGCGCTG
GTGATGCGGG AAGGCGCGAA AGTGGAGCTC GAATCCTTTC GGGCATGGGC CGGAGAACGG
CTGGCTCCGT ACAAGATTCC CAGAGAGATA GCAATCCTTT CCGAATTGCC CCGGAACGCC
ATGGGAAAGG TGTCCAAGCC GGCGTTGAAG GAACGCTTTC AGCGCGAGAA GCCTTAG
 
Protein sequence
MSILLAAQAA RYSDRDAIST PEGVFSYRRL LDASARVASF LLGGSSDLEE KPVAFLAPPG 
FHYVAVQWGI WRAGGIAMPL SLFHPRPELE YVLDDTHPAA VIAHPQLAAV LKPLSEDLRL
RFALSTEALE HAPGVLPTIV ADRRAMILYT SGTTGRPKGV VTTHANLAAQ VTSLVLAWGW
TSEDRILNVL PLHHVHGIVN VLACALRVGA VCEILPRFDP AEVWGRFLRG GLTLFMAVPT
IYVKLIDHWE KSSPADRERM SEACRGMRLM VSGSAALPVG TLEQWRRISG HVLLERYGMT
EIGMALSNPL EGRRIPGSVG SPLPGVEVRL TDESGKPVAI GTPGEIEVRG PTVFLEYWNR
SEDTLKAFRD GWFLTGDIAV EEHGTYRILG RNSVDILKTG GYKVSALEIE ETVRTHPDIR
ECAVVGVPDP VWGDRVCAAL VMREGAKVEL ESFRAWAGER LAPYKIPREI AILSELPRNA
MGKVSKPALK ERFQREKP