| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0290 |
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| Symbol | |
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| ID | 4460892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 346945 |
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| End bp | 349218 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639701045 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_844426 |
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| Protein GI | 116747739 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B
[TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGTT TCACTGACAA AGCGGTTCGC AAGCGCTCTA TCTGGTGGAG ACTGGTCGTT
CTGCTCGGGC TGGTCTGCGT TTTGTTCGCG ACCAGTTACT ATTTCTATCT TTACAATGAA
GTCAGGCAGC GGTTCGAATC CCGCAGGTGG AGCATCCCCG CGCGCGTCTT TTCGGCCACC
GTTCCGATCT ACCCCGGCCA CTCGCTGGCC TTGAGTCAAC TCAGGCAGAT GCTCGAGGAG
CGACGGTACC GGGAGTCCCT GAGGGAACCT TTGCGCGCCG GGGAATTCAA GCTGCACAGG
GGCAGCCTGA TCGTTTTCCT CAGAGACTTC AAATTCCCCG GCCACTGGCT GCGAGCGCAA
AGGGTCATGT TCGAGTTCCA GCAGAACCGG CTGGTGAGAA TCCGCAGCCA GGAAGGCGAT
CTGGCCTATC TCGAGCTCGA GCCCATTGAA ATCGCTCGCC TTTTCGGACG AAACCGCGAG
AGCCGTTTGT TGGTAAACAT CCGGCAGGTC CCGAAGCATC TGAGCGACGC GGTGATTGCC
ATCGAAGACC ACCGCTTTTA CGAGCACGGG GGAGTGGACT GGGTGGGAAT CCTGAGGGCC
GTCTGGACGG ACGTTCTGGC TCGGCGCCTG GTCCAGGGAG GCTCCACCAT CACTCAGCAG
CTGGTGAAGA ACTACTTCCT GGAGCCCGAA CGCAGTCTGA AAAGGAAGAT GCTCGAAGTC
TCGATGGCTT CGATCATCGA GTCGATGTAC GAGAAGGACG AGATCCTCGA GATGTACCTG
AACGAGATCT ACCTGGGACA GCGGGGCGGC GTGGCCATCC ACGGCATCGG GGAAGCGTCA
CGCTTTTTTT TCGGAAGAAA CGTCGAGGAT CTCACCCTGG CCGAATCCGC TACCCTGGCC
GGGATGATAA GGAGCCCGAA TAACTGCTCG CCCCTTACCC ACCCCGATGC GGCCCTCGAG
CGCAGAAACA CTGTCTTGAA GCGGATGCTT GACCTGGAGA AAATCACGGC CCAGGAATAC
GAACAGGCGC GGGCGGAGCG CGTCAGGGTG CCGGGGACCT TTTTGCCGGT GAACACGGCC
CCGTACTTCG TGGACTATGT TCGGCGGCAG CTGCAGGAAC TCTACGAGCC GGGGGTGCTG
GAATCGGAGG GGCTGAACAT ATACACCAGG CTACACCCCG AAATGGCGCT CGCTGCGCAC
AAGGCCGTTG TCGAGGGTCT TCAGGAGCTT GAAAAGGAGC GGGCCGAGGG GGCGCGAGGC
GAAGGAGACG CTTCACCCCC GCTACAGGCT GCGCTCATCG CCATTCAGCC GAAAACCGGG
GCGGTACTTG CGCTGGTCGG GGGCCGGGAC TATGCCGAAA GCAGTTTCAA TCGTGCGCTG
GAAGCGCACC GCCAGCCCGG CTCCACCATC AAACCGTTCA TCTACCTGGG CTCCCTGGAC
CGCTACACGG CCGCCAGCTG GATACCCGAC GAACCGACGC CGTATGTTGT GGACGGCGAT
TCGTGGACTC CGCGCAACTT CGACGATCAC TACCGCGGAC GCGTGACATT CCGGTTGGGG
CTTGAAGAAT CGATCAACGC GGCGACGGTC AACCTGGCCT CCACGGTCGG GCTGGACGGG
TTGATCAAGA CGATCAGAAG CCTGGGAATC CAGTCTCCGC TTCAGCCGGT GCCATCCCTT
GCGCTGGGCG CCTTCGAAGT CACTCCCATT GAACTGGCGG GTGGGTACGC CGCATTGGAC
AATGACGGAC AGAGGCCCTT TCTGCTCAGC CTCAAAGAAG TCGTGGCGGA AAACGGCGAG
GTCCAGGAAC GGCGCGATAT GGATTTCGTC ACGGTGACCA CGCCCGCCAA GGCGTTTCTC
ATTACGAACC TCTTGGAGGG GGCGATGGAG CGGGGCAGCG GGAAAAGCGT GCGCAGGATG
GGAATCGATT TTCGCTGCGC CGGTAAGACC GGAACAACCA GCGACTACCG CGATTCGTGG
TTCGTCGGGT ACACGACCGA CCTTCTTGCA GTGGTTTGGG TCGGATACGA CGACAATCGC
CCCACCGGGC TCACCGGGGC TCGGGGGGCC GGAAGAATCT GGGCGCGCTT CATGAACGAA
GTGCGGCCGT GGATGAATCC CCAGGCTTTC CGTGTTCCTC CGGGGGTGGT ACAGCGCGTC
ATCTGCGGGC AGTCTGGAAA GCTGGCGAAT CCCAGGTGTC CCGATAAGCG GATGGAATAT
TTTCTGGCGG AAAACGAGCT GAAAGAATAT TGTAATATTC ATCGCAGGGA ATGA
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| Protein sequence | MMSFTDKAVR KRSIWWRLVV LLGLVCVLFA TSYYFYLYNE VRQRFESRRW SIPARVFSAT
VPIYPGHSLA LSQLRQMLEE RRYRESLREP LRAGEFKLHR GSLIVFLRDF KFPGHWLRAQ
RVMFEFQQNR LVRIRSQEGD LAYLELEPIE IARLFGRNRE SRLLVNIRQV PKHLSDAVIA
IEDHRFYEHG GVDWVGILRA VWTDVLARRL VQGGSTITQQ LVKNYFLEPE RSLKRKMLEV
SMASIIESMY EKDEILEMYL NEIYLGQRGG VAIHGIGEAS RFFFGRNVED LTLAESATLA
GMIRSPNNCS PLTHPDAALE RRNTVLKRML DLEKITAQEY EQARAERVRV PGTFLPVNTA
PYFVDYVRRQ LQELYEPGVL ESEGLNIYTR LHPEMALAAH KAVVEGLQEL EKERAEGARG
EGDASPPLQA ALIAIQPKTG AVLALVGGRD YAESSFNRAL EAHRQPGSTI KPFIYLGSLD
RYTAASWIPD EPTPYVVDGD SWTPRNFDDH YRGRVTFRLG LEESINAATV NLASTVGLDG
LIKTIRSLGI QSPLQPVPSL ALGAFEVTPI ELAGGYAALD NDGQRPFLLS LKEVVAENGE
VQERRDMDFV TVTTPAKAFL ITNLLEGAME RGSGKSVRRM GIDFRCAGKT GTTSDYRDSW
FVGYTTDLLA VVWVGYDDNR PTGLTGARGA GRIWARFMNE VRPWMNPQAF RVPPGVVQRV
ICGQSGKLAN PRCPDKRMEY FLAENELKEY CNIHRRE
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