| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0289 |
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| Symbol | |
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| ID | 4460891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 345412 |
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| End bp | 346878 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639701044 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_844425 |
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| Protein GI | 116747738 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.198099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGGGGGG GACGCCATGG AAGCAAGGAC CGATTGCCGA CGATGGACGA CTTGAAGAAA
GGCCGGGAGT ACGAGCTCCT GGTGGAAAAG CTGGTTTTTG GCGGGAAAGC CCTTGCGCGC
GTGGAGGGAT TGGTGGTCTT CATGGACCAT GCGGTTCCCG GTCAGCGGGT CAGGGCCTTG
ATCACCAGGA AGAAACGCCA GTATTGCGAA GCCAGGGTCG TGGAGGTGCT CTCGCAATCC
GAGGCGCATA CCGAACCGGT GTGTCCCCAT TTCGGCGTGT GCGGCGGCTG CCAATGGCAG
GATATCGCTT ACGAAGAACA ACTGAAATGG AAACGAGTCC AAGTCGCCGA TTCCCTGGAA
CACCTGGCGG GGGCGCAGGG CGTGAAAATC GAAGCCGCCG TTCCGTCGGA CCGGCTGATC
CACTACCGGA ACAAGATGGA ATTCACATTC TCCGACCGGC GCTGGCTCAC GCCCGAGGAA
ATCGATGCGG CGGGGATGCG GGATGCCTAT ACGTTCACCC TGGGGCTCCA CGTCCGGAGC
TGGTTCGACA AGGTGTTCAA CGTCGAGGAC TGCTTACTGG AGTCGGCCGA GGCGGTCGAG
ATTGTGAAAG AGACCAGGGA CTGGTGCCGG GGGAGCGGCG TTCCCGCGTA CGGCATAAAG
AGCCAGCGCG GCTTCTGGCG GTTTCTCGTG ATCAGGGAAG GAAAGCGGAC GGGGCAGACT
CTTCTGCACC TGGTCACTTC CGATCAACCC GAACACGAAG CAGCCGTGAA CACCCTCACG
CGGCACCTTG TTTCGCGATT TCCGCACATC ACGACCGTCG TGCACTCGGT CAGTCGGAAG
AAGGCCCAGG TGGCGTTCGG CGACCAGAGT CGGGTGGTTG CCGGGCCGGG GGTCATCGAG
GAGCGGTTGG GGGGGCTCAG GTTTCGGATT TCCGCCGAGT CGTTTTTCCA GACCAATCCG
TTCTCCGCGG AAAAGCTCTA TGACGAGGTG TCCCGCCTTG CCGCCTTCCA GGGCACGGAA
ACGGTCTGGG ACCTGTATTG CGGAACGGGC AGCATCGCCC TTTCGGTCGC GCCGCGGGTG
GCCCGGGTGG TGGGCTTTGA AGTCGTGGAC CAGGCGATCG AGGACGCCTG CGTCAACGCG
CGGTTGAACG GGATCGAAAA CGCCCGGTTC ATCTCCGGAG ACTTGAAGGA ACGGATCAAC
CATGCGCGAG GGCCGGGAAG CGGTGAGCAT CACCCGGACA TCGTCATCAC GGATCCGCCA
CGCGCCGGGA TGCATCCGCA GGTGGTCGGG GCGCTGCTGG AAATGGGACC CGGGCGAATC
ATCTACGTGT CCTGCAATCC GGCGACTCTG GCGAGGGACC TGGCTTTTTT CACGGAACGA
TACGAAATCG GGACCGTACG TCCGTTCGAT CTGTTTCCGC ACACTCCGCA CATCGAGTGC
GTGGTGCGGA TGGACAGGAA AAGATGA
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| Protein sequence | MWGGRHGSKD RLPTMDDLKK GREYELLVEK LVFGGKALAR VEGLVVFMDH AVPGQRVRAL
ITRKKRQYCE ARVVEVLSQS EAHTEPVCPH FGVCGGCQWQ DIAYEEQLKW KRVQVADSLE
HLAGAQGVKI EAAVPSDRLI HYRNKMEFTF SDRRWLTPEE IDAAGMRDAY TFTLGLHVRS
WFDKVFNVED CLLESAEAVE IVKETRDWCR GSGVPAYGIK SQRGFWRFLV IREGKRTGQT
LLHLVTSDQP EHEAAVNTLT RHLVSRFPHI TTVVHSVSRK KAQVAFGDQS RVVAGPGVIE
ERLGGLRFRI SAESFFQTNP FSAEKLYDEV SRLAAFQGTE TVWDLYCGTG SIALSVAPRV
ARVVGFEVVD QAIEDACVNA RLNGIENARF ISGDLKERIN HARGPGSGEH HPDIVITDPP
RAGMHPQVVG ALLEMGPGRI IYVSCNPATL ARDLAFFTER YEIGTVRPFD LFPHTPHIEC
VVRMDRKR
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