Gene Sfum_0285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0285 
Symbol 
ID4461074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp339864 
End bp340748 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content60% 
IMG OID639701040 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_844421 
Protein GI116747734 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.445899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCATG TTCAGCTGGT CCGCGAGAGA TGGATCCGAA GGAGTCTTCT GATCGCCACG 
GGGATATCCG CGGGCGCGAT CCTTTTCATC TTCGTTCTCC TCGTCTATTT CTGCCTGCCT
CTTATCACCT CGGGCGGGAT GAGCTCCGTT CTTTCGTGGC AGTGGAAGCC TTTCGCAGGT
GAGTTCGGAA TCCTGCCCAT GTGCGCGGGC TCGCTGTTAC TTTCGGTATT CGCCCTGGGA
CTGGCGTTCC CCGCGGCCAT AGGCATCTGC GGCTTCGCGA CCGTCCTTGC CGCCAGGAGC
CTTGCCCGTT TCACCCTGGT CCTGGTCCAC TTCATGACAA GCATTCCGAC CGTCATTTAC
GGCTTCGTTT CCGTCTTCCT CCTTGTTCCT CTCGTGCGGG ACTGGTTCAG CACCGGAACC
GGCTTCTCTT TCCTGACCGC GGGACTCTCT TTGAGTCTGC TCATCCTGCC GACCATCGTC
CTGGTGTTCC ATGCCCGGTT GCAGCAGATC GATCCCGCCC TTCGTCTTGC CGCGGAGGCC
ATGGGACTGA CGCCGGTCCG CCAGTTTCTG CACGTGCTTG TTCCCGCGGC ATCGAGGGGC
CTTGTCGTTG CAGCGATACT GGGATTTGGA CGGGCCATCG GCGACACCCT GATTTCCTTG
ATGCTTGCCG GCAACGCGCC CCGGATTCCG GATTCTCTCT TCGATTCCAT CCGGACGCTC
ACAGCCCACA TCGCCCTGGT CCTCGCAACG GACAGTCAGA GCATGTCTTA CCGATCCGTA
TTTGCTTCGG GCCTGATTCT TTTCCTGCTG ATGGGCGCCG CCAATTTCTT TATTCGCAGG
ATGGACCGCG GTCCCGGGGA GAACCGGTAT GAAAACGGCC GCTGA
 
Protein sequence
MNHVQLVRER WIRRSLLIAT GISAGAILFI FVLLVYFCLP LITSGGMSSV LSWQWKPFAG 
EFGILPMCAG SLLLSVFALG LAFPAAIGIC GFATVLAARS LARFTLVLVH FMTSIPTVIY
GFVSVFLLVP LVRDWFSTGT GFSFLTAGLS LSLLILPTIV LVFHARLQQI DPALRLAAEA
MGLTPVRQFL HVLVPAASRG LVVAAILGFG RAIGDTLISL MLAGNAPRIP DSLFDSIRTL
TAHIALVLAT DSQSMSYRSV FASGLILFLL MGAANFFIRR MDRGPGENRY ENGR