Gene Sfum_0284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0284 
Symbol 
ID4461073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp339002 
End bp339880 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content61% 
IMG OID639701039 
Productphosphate ABC transporter, inner membrane subunit PstA 
Protein accessionYP_844420 
Protein GI116747733 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.466037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGG CCGCTGATCT TCTCCTGACC GCATATGCCT GGTTTTGCGC GATTGCGGTT 
TTTCTCGCGA CTTCGTTTCT GCTCGGTTTC CTGTTCAAGC GGGGAATGGG CGTCATGCAC
CCGAGCCTCT TTTTTGGTGA TACCCCGTGG TTTTCAGCGC TCCTGGGGGC AAGCCCCGTG
TTCGAAGGAA TATGGCCGGC ACTCGTGGGG ACCCTGGCCC TGGTTCTCGT TTCGTCGGTA
ATGGCCATCC CGGTCGGCAT TGCAAGCGGC ATCTATCTTT CCGAATACGC GTCGGCGCGC
GTCCGTTCCA TGCTCGGGTT TGCCGTGGAT GTTCTGTCCG GTACCCCATC CATCGTCATG
GGGCTGTTCG GATTCACGAT GATCCTCTTC CTTCGCAAAA CCGCATTGCC GCAGGCCAGA
CCGTCCCTTT TCCTCGCGGC GGTTTGTATC GCGCTGCTCA TCCTGCCCTA CGTGATTCGA
ACGACGCAGA CGGCCATGGA AGCCATACCC GAGCACCTCA GGCTGCTTGG TCCGAGCCTG
GGGCTTACCC GTTGGCACCA CGTCCGACAC GTGCTGTTGC CGTCGGCAAG CCGGGGAATC
CTGAGCGGCG CCATCCTCGC CCTGGGGAGA GCGTCCGAGG ACACGGCCGT TATCATGCTG
ACCGGCGTCG TGGCGCGCGC CGGCCTTCCC GCCAGCCTGT GGGACAAGTT CGAGGCGCTG
CCCTTCCGCA TATACACCCT GGCGGCCGAG CACCGGAGCG TCCAGGAACT GGATCAGGGT
TTCGGCATGG CCCTGGTGCT CCTGCTCATG ACGGGCAGCC TTTTTGCCGT CGCGTCTTTT
CTTCAAAGAA GCCTCGAAAA ACGATGGAAA ACAACGTGA
 
Protein sequence
MKTAADLLLT AYAWFCAIAV FLATSFLLGF LFKRGMGVMH PSLFFGDTPW FSALLGASPV 
FEGIWPALVG TLALVLVSSV MAIPVGIASG IYLSEYASAR VRSMLGFAVD VLSGTPSIVM
GLFGFTMILF LRKTALPQAR PSLFLAAVCI ALLILPYVIR TTQTAMEAIP EHLRLLGPSL
GLTRWHHVRH VLLPSASRGI LSGAILALGR ASEDTAVIML TGVVARAGLP ASLWDKFEAL
PFRIYTLAAE HRSVQELDQG FGMALVLLLM TGSLFAVASF LQRSLEKRWK TT