Gene Sfum_0283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0283 
Symbol 
ID4461072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp338235 
End bp339017 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content59% 
IMG OID639701038 
ProductABC transporter related 
Protein accessionYP_844419 
Protein GI116747732 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.288086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA ACGTGATCGA CCAACAGGTG GAACCTTCCG TGACCATACG GGGTCTTTCG 
GTTCGGTTTT CGGAGAGAAC CGTTCTGGAT CGGATCAGCT TCACTGCCTG CCCCGGCCGG
ATCATCGTGA TCGTCGGCCC TTCCGGGTCG GGAAAAACAA CCCTTCTGCG GGCCGTCAAC
CGGCTGAACG AATGCTTCCC CAACTGCCGA ACCGAAGGTT CCGTGGAGCT TCGCCTCAAC
GGCAGGGATG GGGACATCTA CCGGGACTTC GTTCCCCTCC CGGATCTGCG CAGGAACGTC
GGAATGGTTT TCCAGACCCC GAGCGTTCTT CCCTTTTCAA CGAGGAAGAA CCTGGCCATG
CCACTCAAGG TGACGCTAGG CCTGGACGGC GCGAGGCTCT CCGAGAGAGT GGAATGGGCT
CTGCGTGAAG TCTCGTTGTG GGATGAGGTC AAAGACAGGC TGCACGCCGA TGCGTCCACT
CTTTCAGGCG GGCAGCAGCA GCGACTGTGC CTTGCAAGGG TCCTGGCGCT CGAGCCGCAG
ATTCTCCTCC TCGATGAGCC GACGGCCTCC CTTGACTTCA AGGCCACCGA AAAGATAGAA
GAGCTTCTGA CAAGGCTGAA GAAGCGCTAC ACCATCCTGG CCGTCTCTCA CAGCCTGAGT
CAAACGCGAC GACTGGCCGA CAGGGTCTGC GTTCTCAGGG AGGGCCGGAT TGTTCGGGAA
TTGGACCATC AGCACCTGCA AGACCTGAAC GAGTTCCAGA GGCTTGTCGA GGATGCCTTC
TAG
 
Protein sequence
MENNVIDQQV EPSVTIRGLS VRFSERTVLD RISFTACPGR IIVIVGPSGS GKTTLLRAVN 
RLNECFPNCR TEGSVELRLN GRDGDIYRDF VPLPDLRRNV GMVFQTPSVL PFSTRKNLAM
PLKVTLGLDG ARLSERVEWA LREVSLWDEV KDRLHADAST LSGGQQQRLC LARVLALEPQ
ILLLDEPTAS LDFKATEKIE ELLTRLKKRY TILAVSHSLS QTRRLADRVC VLREGRIVRE
LDHQHLQDLN EFQRLVEDAF