Gene Sfum_0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0270 
Symbol 
ID4461059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp325248 
End bp325730 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content59% 
IMG OID639701025 
Producthypothetical protein 
Protein accessionYP_844406 
Protein GI116747719 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.460305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.715932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGAC TGACCTGTTT TCCCGTCGGA GTCATTCGGT CCCCCTATAA GGAGATCCAG 
GGGATGCCCA TCCAGGCCAA AGGAGCCGAA GGTGTTCCGG GAACGGTGGA GCTGAACGCG
GAATTGGAAG GCGGATTGAA GGACCTGCAA GGCTTCTCGC ACATTATCCT GATCTACCAT
TTCCACAGGA GCGAGGGCTA TTCCCTGGAG GTCAAGCCCT TCCTGGACGA CCGATGCCAC
GGGGTGTTCG CCACGCGGGC TCCCAGGCGT CCCAATCCCA TCGGCATTTC CATCGTGAGA
CTTCTGAAGG TGGAAGGGAA CATCCTGCAC ATCGAGGATG TCGACGTGCT CGATGGGACG
CCCCTGCTGG ACATCAAACC CTACATCCCG GAATTTGACG CGCGGGAAAC GGACAGGATC
GGGTGGCTGT CCGGCAAAGC CGGCCGGGTG AAAGAAACGC GGGCGGACGA TCGGTTCAAA
TGA
 
Protein sequence
MQGLTCFPVG VIRSPYKEIQ GMPIQAKGAE GVPGTVELNA ELEGGLKDLQ GFSHIILIYH 
FHRSEGYSLE VKPFLDDRCH GVFATRAPRR PNPIGISIVR LLKVEGNILH IEDVDVLDGT
PLLDIKPYIP EFDARETDRI GWLSGKAGRV KETRADDRFK