| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0269 |
|---|
| Symbol | |
|---|
| ID | 4461058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 322987 |
|---|
| End bp | 325224 |
|---|
| Gene Length | 2238 bp |
|---|
| Protein Length | 745 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639701024 |
|---|
| Product | peptidase S15 |
|---|
| Protein accession | YP_844405 |
|---|
| Protein GI | 116747718 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2936] Predicted acyl esterases |
|---|
| TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.485084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.582003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGGAC ATGCCGGAGA AGGCGGCCGG CCGGCGGCGG CCGGTCCGCC CGAAGGAATT
GATTCCCTGC CGGCTCCATT CCCGGCCAGG GACAAGGTCC CCGACCCGGA GCGGATCACC
TTTACGGTCC GGTACCCGGG CAAGGACCCC ATCAAGCTGG AAGGACATTT CTGGTACAAC
AAGGATGCGA GGGCGGCAGG CAGAAAGTGT CCCGCCATTG TGGAGCTGAA TCCCTACCGG
CGCAGGGACG GGATGATGTC CTCCGACAGC GGTTATTATC CGTGGTTTGC CTACCACGAA
TACCTGTGTT TCCGGGTCGA CCTGCAGGGG GCGGGGGATT CGCAGGGCAT TCTCATTGAC
GAGTACACGG ATGAAGAGCT CGTCTATTGC ACGCAGGTGA TCGAACAAAT CGCCGTCCAC
CCCTCCTGCG ACGGGAACGT CGGGATGACG GGCACATCCT GGAGCGCCAT CAATTCATTG
ATGGTGGCCG CGCGAGCCGA TTGTCCCCCG GCATTGAAGG CCGTTCTCGT GATCTGCGGG
ACGGACGACC GTTACAACGA TGACGTGCAT TACATGAACG GCGCCATGAT GCAGGACAAC
ATCGGGTGGG CGTCCTCGAT GTTCGGCTGG CTTGCTCAGC CTCCGGATCC CCTCGTGGTC
GGGGATCGTT GGAAGAGCAT GTGGCGTGAG CGAATCCGCG CGGCGGATTT CTGGTTCAAG
CATTGGGGGA AGCACCAGGC TAGGGATCTC TATTGGAGTG CTTCAAGCGT CAGGGACAGA
TACGGCCGAG TGCAGGTGCC CGTTTACATC GTGTCCGGTT ACCAGGACGG CTACAAAAAT
CCGGTGCCTC GCGTTGTCGG CGGACTGCGC GCCGCGGGGA TGCCGGTGCA GGGGCTGCTC
GGTCCCTGGG GGCATGCCTG CCCCAACTCG GGTTATCCCG GGCCCAGGAT TGACTGGCTT
CCCTACGTCC TGACGCACTG GTGGGACAGG TGGCTCAAGG GAAAGACGCC GGACCCCGAC
GCGGAGTTGC CCGAGATGAC CGTATGGCTC GGCGAGTCCA AAGAACCCGG CAGTTCCAGT
TGCCGGCCGG AGAAGGGCAG GTGGGCGGCC GAAGATGGGG AATGGACGAC CCGTGTCAGG
GAGAGAATCT TCTATTTATG GCCCGATGGC CGGCTCAGAT CCGGATTGCC GGATTCCGGC
GCGACTTACG TCGGCACGGG CGACCTCGTT GTGGCCGCCA GGATGCTCGA AACCTCCTCA
TGGGGCCATT GCGGAAACAA CGATCTCCCG GGGGACCAGT CGCAAGCCGA CGCCGCGTCG
CTGCATTTCG ACAGCGCTCC GCTCCCGAAG GATCTGGATT GTTTCGGTTA TCCGACGGCA
TGCCTTAAGC TCTCATGCAA CAAGCCCGTT GCGTCCATCG CGGTTCGCCT GTGTGAAGTG
AGCCCCGACA CAGGGGCTTC TCACCTGGTG AGCTACCGTT TCTTCAACCT TTGCTGCCGG
GACGGCGACA TGGCAAAGCC ACGGCCGGTC GAGCCCGGTG TCGTCTTCGA TGTGGTCGTG
CCGCTCAACG TGATCGGTCA CACCTTCAAG CAGGGCTGGC GTATCCGGCT TTCCGTCTCG
CCTTCATTCT TCCCGACGAT GTGCCCGAGC CCGGAGCTCG CGACCATCAC CGTGTACGCA
GGCCGTGCCG GGACCGGTTC CCGCATGAGC GCGCTTTCCT TGCCCGAGCG CAAGCCGAGA
CCGGAGGACG GGCGCCTGGA AAGCCTGCTA CCGCCGGCTC CCCGGATTTT ATGGGTGGAT
TCCGGTACCT ACGTGCCGAC CGTAACCGCC CGAAACGGGG AGGACTCTCG CCTGGTGAGG
CAGTTTACCG TTCTGGGGAG AAAGGGCACG GTGGTCAGAA AAACGACCGA CTACGGCCGA
TACCGCTATG ACGGGCCTCT CGAGGGGCTG TGGGTCGACG AGGTGGATCG CGAGAACTTC
ATAGTTGTCC ACGACGAGCC CCTCACTTTT TGCGGGTTCA CCAGCTCGAG GGTGATCCTG
GACAGGAACA CGGGCGGATC GCACTGGAAG GTGATGGCCA GGAGAACGAC CAAGGTCTCG
ACGGAGTGGG ATTCCGGAGG TCGGCTGGTG TTCAGGTACA AGGCGACGAT CCGGACATTT
ATCGGCAAAC CCGGCGGCGG CTGGGAACCG TTCGAGAACA AGACCGTCGA GGGGACGATT
CCACGGTTGT GGGTGTAA
|
|---|
| Protein sequence | MPGHAGEGGR PAAAGPPEGI DSLPAPFPAR DKVPDPERIT FTVRYPGKDP IKLEGHFWYN
KDARAAGRKC PAIVELNPYR RRDGMMSSDS GYYPWFAYHE YLCFRVDLQG AGDSQGILID
EYTDEELVYC TQVIEQIAVH PSCDGNVGMT GTSWSAINSL MVAARADCPP ALKAVLVICG
TDDRYNDDVH YMNGAMMQDN IGWASSMFGW LAQPPDPLVV GDRWKSMWRE RIRAADFWFK
HWGKHQARDL YWSASSVRDR YGRVQVPVYI VSGYQDGYKN PVPRVVGGLR AAGMPVQGLL
GPWGHACPNS GYPGPRIDWL PYVLTHWWDR WLKGKTPDPD AELPEMTVWL GESKEPGSSS
CRPEKGRWAA EDGEWTTRVR ERIFYLWPDG RLRSGLPDSG ATYVGTGDLV VAARMLETSS
WGHCGNNDLP GDQSQADAAS LHFDSAPLPK DLDCFGYPTA CLKLSCNKPV ASIAVRLCEV
SPDTGASHLV SYRFFNLCCR DGDMAKPRPV EPGVVFDVVV PLNVIGHTFK QGWRIRLSVS
PSFFPTMCPS PELATITVYA GRAGTGSRMS ALSLPERKPR PEDGRLESLL PPAPRILWVD
SGTYVPTVTA RNGEDSRLVR QFTVLGRKGT VVRKTTDYGR YRYDGPLEGL WVDEVDRENF
IVVHDEPLTF CGFTSSRVIL DRNTGGSHWK VMARRTTKVS TEWDSGGRLV FRYKATIRTF
IGKPGGGWEP FENKTVEGTI PRLWV
|
|---|
| |