Gene Sfum_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0255 
Symbol 
ID4461249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp303178 
End bp304347 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content63% 
IMG OID639701010 
Producthypothetical protein 
Protein accessionYP_844391 
Protein GI116747704 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTCC TGGCTCGCTA CAGTTATCGC AATTTATGGG TTCGTCGCCT TACGACCGCT 
CTGACGGCCG GCGGGATGGG GCTGGTCATC TTCGTCTTCG CGGCTGTCCT GATGCTGGCC
GCAGGGTTCC AGAAGACGCT CGTGACCACG GGGAGCCCCG ACAACGCGGT GTTCGTGCGC
AGATCATCGG AGGCGGAAGT GCAGAGCCTC GTTTCCCGGG AGGAGGCCGC CATCGTCGAG
AGCATGCCCG AAATCGGCCT CGGCCGGGAC GGCACGAAGC TGGCGGCGCG CGAGGCGGTC
ATTCTGATCA ACCTGAGCAG GCGGGATACC GGCAACCTGG CCCACGTCAC GGTGAGGGGC
ATCAACCCTA AGCTCTCCAT GCAATTGCGT CCCCGGGTAC GCATCTCGGC CGGACGCGAG
CCCCGGTCGG GGACGTCCGA AATACTGGCC GGCAGGAGCA TCATGCAGAG GTTCGCGGTC
GGCGGGCTCG GGCAGACCAT GTCGTTCGGT TCCCGCACCT GGACGGTGGT CGGTATCCTC
GATGCCGGCG GAACGGGGTT CGACTCTGAA ATCTGGGCCG ACGTCGAAGT CCTGATGACC
ACTTTTCGCC GGAGCGCATA TTCTTCCGTA ATCGGCCGCC TGAGGGAACC GTCGGCTTTC
CAGGATTTGC GCAAGCGCGC GATGAGTGAC CCCCGTCTCA CGTTGGAAAC CTGGCGAGAA
ACGGACTACT ACGCCTCTCA ATCCGAACTG ATGGCCCGTT TCATTCGGAT CCTCGGCCTG
ACCCTGACGC TTATCTTCAG CCTTGGAGCA GTGATCGGCT CCATGGTCAC CATGTATTCG
GCCGTGGCGA ACAGGGTGTC GGAAATCGGG ACTCTGCGGG CCCTGGGATT TCGCCGCGCG
ACCATCCTGA CCGCATTCCT CCTCGAATCG GTTTTTCTCA GCCTGGTGGG TGGCGGCCTG
GGGCTGGCGG CGGCATCGTT CATGAACCGC ATCAGTGTTT CCACCATGAA CTGGCAGACG
TTTTCCGAGC TTTCCTTCCG CTTCGCCCTG GACTCCTCCA TCGTCGTGAA CGCGCTGGCC
TTCGCGGTGG TGATGGGCCT GGTCGGAGGG ATTCTGCCCG CGCTGCGGGC CGCGCGGATG
AACATCGTGA CCGCGCTGCG GCTCCAGTGA
 
Protein sequence
MFLLARYSYR NLWVRRLTTA LTAGGMGLVI FVFAAVLMLA AGFQKTLVTT GSPDNAVFVR 
RSSEAEVQSL VSREEAAIVE SMPEIGLGRD GTKLAAREAV ILINLSRRDT GNLAHVTVRG
INPKLSMQLR PRVRISAGRE PRSGTSEILA GRSIMQRFAV GGLGQTMSFG SRTWTVVGIL
DAGGTGFDSE IWADVEVLMT TFRRSAYSSV IGRLREPSAF QDLRKRAMSD PRLTLETWRE
TDYYASQSEL MARFIRILGL TLTLIFSLGA VIGSMVTMYS AVANRVSEIG TLRALGFRRA
TILTAFLLES VFLSLVGGGL GLAAASFMNR ISVSTMNWQT FSELSFRFAL DSSIVVNALA
FAVVMGLVGG ILPALRAARM NIVTALRLQ