Gene Sfum_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0242 
Symbol 
ID4461318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp282742 
End bp284157 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content60% 
IMG OID639700997 
Productphospholipase D/transphosphatidylase 
Protein accessionYP_844378 
Protein GI116747691 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.733383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.348434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCT TTCTCACCGC AGCGCAGTGG ATCATTCCCA TTGCAATGGT ACCGGTCGCG 
GCTCACGGGC ATTCGCCGGT CGGAGCCCTC GCGTGGCTTC TATTCATCTT CTTCAAGCCG
TGGGCGGGTT TGATCCTCTA CTTCCTGTTC GGCACCAACC TGGTCATGAG GAGGCTCACC
AAGAGCTACT GTCAGAGGCT CAGAGAGGTG CGGTCGTTTT CCGACCTGGC GATCATGGAA
CCTCACGTGT TCGGGCTTTC GTCGGAGCAG ACGGAACACC GGCTGGCGAA GATGACGGAG
CGGTTGGCGT GCATGCCCAT TCTTCAGGGC AACGAGGTCG AGTTCATCGA CAACGGTTTT
GCGGTCATCG ACCGGATGAT CGCCGATATC GGGAAGGCGC GCGACCATGT GCACCTGCTG
TTCTACATCT TCAACGACGA TGAGGTCGGC CGGCGGGTTG CCGAAGCTCT TGCCGGAGCG
GCCGCGCGGG GGGTGCCGTG TCGAGTGGTG GTGGACGCCT TCGGGTCGAG ATCGCTGAAC
GGTTCGCTGG GCGAATGGAT GGTGAAGCGG GGGATCGATT TCCAGACCCT CATGTCGATC
AATCCCTTCC GCAGGCACCT CACCCGCCTG GATCTGCGCA ATCACAGGAA GCTCGCGGTG
ATCGACGGGA CCATCGCCTA CACGGGTTCC ATGAATATCG AGACAAAAGA CTACGATCAG
GGGCGGGCCG AAGCCTGGCA CGACCTGATG GTCCGCGTCA CGGGTCCGGT CGTCATGCAA
TTGCAGCTGG TGTTCGGCGA AGACTGGTAC CTTGCGACCG ATAAGCTGCT CGAGGGGCCG
GGGATCTATC CCGTTCTCGA TCGGGGCGGA ACCGTTCCCA TGCAGGCCGT GCCCACCGGT
CCCATGGACC CCACCACCGT GCTGCGGGAT CTGCTCATTG CGGCAGTCAG CGGAGCACGC
GAGAGGATCA TCATCACTTC GCCGTACTTC ATTCCGGACG AATCGCTTCG CGTCGCCCTC
CATCTGGCTT CGTTGCGCGG GGTGAGCGTG GAACTCGTCA TCCCCTTCAA TGCCGACCAC
CCGGTGGTGG GGGCAGTGGC CAGGGCTCAT TTCGAGTGTC TCATCGACGG CGGCGTCAAC
ATTTATTTCC ACCGGGGAGT GCTGCACGCC AAGACCATGA GCGTCGACGA TGAAGTGTCA
CTCGTGACGA CGGCTAATTT CGATCGAAGA TCGCTCTTTC TTCATTCCGA GCTGAGCCTT
TTTCTCTACG GACGGGAAGT CACCGCCCGG TTGCGCGATC TGCAGTCGAA GTACATCGCG
CATTCGGACA AGGTGGACCC GGCGCGATGG AAGCGAAGAT CGGTGATTCG CAGAAGCAGG
GATGAAATTC TCAAATTGTT GAGCCCGGTG CTCTAG
 
Protein sequence
MDGFLTAAQW IIPIAMVPVA AHGHSPVGAL AWLLFIFFKP WAGLILYFLF GTNLVMRRLT 
KSYCQRLREV RSFSDLAIME PHVFGLSSEQ TEHRLAKMTE RLACMPILQG NEVEFIDNGF
AVIDRMIADI GKARDHVHLL FYIFNDDEVG RRVAEALAGA AARGVPCRVV VDAFGSRSLN
GSLGEWMVKR GIDFQTLMSI NPFRRHLTRL DLRNHRKLAV IDGTIAYTGS MNIETKDYDQ
GRAEAWHDLM VRVTGPVVMQ LQLVFGEDWY LATDKLLEGP GIYPVLDRGG TVPMQAVPTG
PMDPTTVLRD LLIAAVSGAR ERIIITSPYF IPDESLRVAL HLASLRGVSV ELVIPFNADH
PVVGAVARAH FECLIDGGVN IYFHRGVLHA KTMSVDDEVS LVTTANFDRR SLFLHSELSL
FLYGREVTAR LRDLQSKYIA HSDKVDPARW KRRSVIRRSR DEILKLLSPV L