Gene Sfum_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0240 
Symbol 
ID4461316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp280561 
End bp281214 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content61% 
IMG OID639700995 
Productmethyltransferase type 11 
Protein accessionYP_844376 
Protein GI116747689 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.373296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.164188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCG ATTCCGGCGA TCGCTACCGG CGGTTGGCGC CGCTCTACGA CGGGCTGACC 
GCACCTTTTC TGTGGAGCGT CCGGTCGGAC ATCCGCCGGA TCGTTCAGGA ATGCGGTTAT
CGCACGGTGC TCGACGTCTG CTGCGGAACC GGGCGGATGG CGATGATGCT TCATGGAAGC
GGCTTCAGCG TGAGCGCGGT GGATCTTTCC CCGTCCATGC TGGCCCGGGC GCGCAAGAAC
AGTCCGCCCG GAATTCGATA TTTTCTGGAG GATGCCGCCC GCCTGCACTT TCAAACCGCG
TCCTTCGATT GCGCGATCAT TTCATTCGCC CTGCACGAAA TGAATCCGTC CAAGCGCATG
CATGTGCTTG CCGAAACGTC GAGGGTCACG CGCAAAGGAG GCGCAATCAT CGTTGCGGAC
TATATCAGAC CCCGCGGGAT GCTTGCCAAT GGATTTCGAG CCGTGGTGAA CATTGTCGAG
AGAATCGCCG GCAAGGACCA CCACGCCAAT TACGTGACTT TCGTCAGGGA AGGCGGCCTC
GAACCGCTGG CGGCAGGCCT CGGCATGAAG CTCACGGTGC GGCGTCGCGC CTTCATGGAC
AACGCCGCGG TGATGGTGAT CGAGGCAAAC GGAACTCCCC GCACGCTCAT TTGA
 
Protein sequence
METDSGDRYR RLAPLYDGLT APFLWSVRSD IRRIVQECGY RTVLDVCCGT GRMAMMLHGS 
GFSVSAVDLS PSMLARARKN SPPGIRYFLE DAARLHFQTA SFDCAIISFA LHEMNPSKRM
HVLAETSRVT RKGGAIIVAD YIRPRGMLAN GFRAVVNIVE RIAGKDHHAN YVTFVREGGL
EPLAAGLGMK LTVRRRAFMD NAAVMVIEAN GTPRTLI