Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0236 |
Symbol | |
ID | 4461312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 276536 |
End bp | 277189 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639700991 |
Product | hypothetical protein |
Protein accession | YP_844372 |
Protein GI | 116747685 |
COG category | [C] Energy production and conversion |
COG ID | [COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000188385 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.437472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAAC CGTTTGATCA CTACTGGCAA CTCAGATTGA GCGACCTCAA GGAGACTCTG GAGGCCAACA ATTTTGAGGT TTTTCTGGCC GACAACAAGG AACAGGCCTG CAAGCTGGTG CTGGAACGAA TCATCCCGGG AATCGGGGCG AAGTCGGTTT CCTGGGGAGG ATCGATGACG TTCGTTGCCA CGGGATTGTA CGAAAAGGTA AAGGCTTTGC CCGGGCTTGA AGTGATTGAC ACGTACGACC GTTCGATTCC ACGGGAAGAG GCGACGGAAA GGCGCAGACG GGCGCTGCTG GTGGATCTTT ACATCACCGG GACAAACGCC GTGACGGAAA CCGGAAAACT GGTGAACCTC GATATGACCG GCAACCGCGT GGCATCGATC ATCTTCGGGC CCAGGAACGT GATTCTCCTG ATCGGCAGGA ACAAGGTGGT TCCGGACCTG GAAGACGCGA TGCTTCGCGT CAAGAATTTC ACTGCACCCG TTAACGCCAT GCGGCTGGAT ATGCAGACAC CCTGCGTCAG CACGTCGTTT TGCGAGGAGT GCAAGAGCCC ATCCAGGATC TGCAATACCT GGACGATCAC GGAAAAATCG TTTCCCAAGG GGCGGATCAA GATCGTCCTG ATCAATGAAG ACCTTGGAAT CTAG
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Protein sequence | MDKPFDHYWQ LRLSDLKETL EANNFEVFLA DNKEQACKLV LERIIPGIGA KSVSWGGSMT FVATGLYEKV KALPGLEVID TYDRSIPREE ATERRRRALL VDLYITGTNA VTETGKLVNL DMTGNRVASI IFGPRNVILL IGRNKVVPDL EDAMLRVKNF TAPVNAMRLD MQTPCVSTSF CEECKSPSRI CNTWTITEKS FPKGRIKIVL INEDLGI
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