| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0230 |
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| Symbol | |
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| ID | 4461306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 270633 |
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| End bp | 271286 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639700985 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_844366 |
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| Protein GI | 116747679 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0222965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.256971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATACA AACCGAGAGA GCTGATGAAC GGGTTGACGC ATTGCATTGC GGCTCTGCTT
GCCGTGGCGG GACTGGTGGT GCTCATGCTC CGAGCCGTCG ATCCTCCCAG GCCGCTGCAC
CTGCTCTCCT TCTTCGTGTT CGGAACGGCT CTGATCCTGC TCTACCTGAC AAGCACCGCG
TACCACTGGG CGCAGTGCTC GGTCAAGGGA CTCCAGAGGC TGCGACGACT CGATCACATC
ATGATATTCG TGGTGATAGC GGCAACCTAT ACCCCGATCT GTCTCATCCC TTTACGCGGC
CCCTGGGGAT GGACGCTCTT CGGCGGTATC TGGGCTCTGG CCTGTGCGGG AGTGCTGATG
AAAATGGTTT GGCTGCAGAC TCCGCGTTGG CTCTCCACGA CGGTGTACGT CGCCATGGGC
TGGCTTGCGG TGGTCGCGGT TTATCCCCTG TACCGCGCGC TGCAGCCTGC CGCTTTTGCC
TGGCTCGTGG CGGGCGGACT GTTCTACACG GCGGGAGCCC TGGTCTATGC CCTGAAGAAA
CCCGATCCGT GGCCCAGGGC GTTCGGGTTC CACGAGCTTT TTCACGTTCT GGTGGTGATG
GGGAGCTTTT CCCACTTCTG GGTTCTATAC GAATATGTCG TTCGAATCGA CTGA
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| Protein sequence | MRYKPRELMN GLTHCIAALL AVAGLVVLML RAVDPPRPLH LLSFFVFGTA LILLYLTSTA
YHWAQCSVKG LQRLRRLDHI MIFVVIAATY TPICLIPLRG PWGWTLFGGI WALACAGVLM
KMVWLQTPRW LSTTVYVAMG WLAVVAVYPL YRALQPAAFA WLVAGGLFYT AGALVYALKK
PDPWPRAFGF HELFHVLVVM GSFSHFWVLY EYVVRID
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