Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0227 |
Symbol | |
ID | 4461303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 268291 |
End bp | 268848 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639700982 |
Product | NUDIX hydrolase |
Protein accession | YP_844363 |
Protein GI | 116747676 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.282406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.264577 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGAAA AGATCAAGAC GCTCAGCATG ATTTTCGCGA GCCATTTCAG CGCTCAGCTC GATGTCGTTC GGTTGCGCAC GGGCAGGCTC ACGGAACGGA TCAAGATCGA TCACCCCGAA GCCGCGGCCG TTGTGCCTTT CCTCGATGCC GAGCGCATCC TGATGGTCCG GCAGTGGCGT TACGCCATCG GCAAGGAAAC CCTGGAGATT CCGGCCGGGA AGGCGGACCC CGGGGAAGAG CTCGAAGCGT GCGCCGCGCG GGAACTGCGG GAAGAAACCG GGTACGAGGC GGCCCGCATT CTGCCGATTT TCGAGTATTA CCCGGCCATT GGATACTCGA ACGAGGTCAT ACGCCTTTAC GCCGCTTCGG GCCTGCGACG CATCACCGGC AAATGGGATG AAGACGAGAT TTCCAAGGTG GAAATCGTGG GCTTGGATCG TGTTCAGGAC TTGATTCTGC GTGGTCTCAT TCAGGACGGC AAGACGGTCA TCGGCGTTTC GCTGTTCAAG GCCAGGCGGG AAAAAGGAGA AATCCCGGAG GGGTTCTTCA GGGATTAG
|
Protein sequence | MEEKIKTLSM IFASHFSAQL DVVRLRTGRL TERIKIDHPE AAAVVPFLDA ERILMVRQWR YAIGKETLEI PAGKADPGEE LEACAARELR EETGYEAARI LPIFEYYPAI GYSNEVIRLY AASGLRRITG KWDEDEISKV EIVGLDRVQD LILRGLIQDG KTVIGVSLFK ARREKGEIPE GFFRD
|
| |