Gene Sfum_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0227 
Symbol 
ID4461303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp268291 
End bp268848 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content59% 
IMG OID639700982 
ProductNUDIX hydrolase 
Protein accessionYP_844363 
Protein GI116747676 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.282406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.264577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAA AGATCAAGAC GCTCAGCATG ATTTTCGCGA GCCATTTCAG CGCTCAGCTC 
GATGTCGTTC GGTTGCGCAC GGGCAGGCTC ACGGAACGGA TCAAGATCGA TCACCCCGAA
GCCGCGGCCG TTGTGCCTTT CCTCGATGCC GAGCGCATCC TGATGGTCCG GCAGTGGCGT
TACGCCATCG GCAAGGAAAC CCTGGAGATT CCGGCCGGGA AGGCGGACCC CGGGGAAGAG
CTCGAAGCGT GCGCCGCGCG GGAACTGCGG GAAGAAACCG GGTACGAGGC GGCCCGCATT
CTGCCGATTT TCGAGTATTA CCCGGCCATT GGATACTCGA ACGAGGTCAT ACGCCTTTAC
GCCGCTTCGG GCCTGCGACG CATCACCGGC AAATGGGATG AAGACGAGAT TTCCAAGGTG
GAAATCGTGG GCTTGGATCG TGTTCAGGAC TTGATTCTGC GTGGTCTCAT TCAGGACGGC
AAGACGGTCA TCGGCGTTTC GCTGTTCAAG GCCAGGCGGG AAAAAGGAGA AATCCCGGAG
GGGTTCTTCA GGGATTAG
 
Protein sequence
MEEKIKTLSM IFASHFSAQL DVVRLRTGRL TERIKIDHPE AAAVVPFLDA ERILMVRQWR 
YAIGKETLEI PAGKADPGEE LEACAARELR EETGYEAARI LPIFEYYPAI GYSNEVIRLY
AASGLRRITG KWDEDEISKV EIVGLDRVQD LILRGLIQDG KTVIGVSLFK ARREKGEIPE
GFFRD