Gene Sfum_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0218 
Symbol 
ID4461294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp254965 
End bp255960 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content45% 
IMG OID639700973 
Producthypothetical protein 
Protein accessionYP_844354 
Protein GI116747667 
COG category[S] Function unknown 
COG ID[COG2253] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.270651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGAT TCTACGGAAT TTCGGCTGAG AAACAACGAA AGTTCTGTGA AGAGGCAAAG 
AGTATAGTTG GCTATCCACC GATCACTATC GAAAAGGATT TTTGGGTTTG TTTCATCCTG
CGGGAACTCT TTGGTCTGCA GAATTGGGGT CAGCATCTGG CATTCAAGGG GGGCACTTCT
CTTTCCAAAG GATGGCAGCT AATTTCAAGG TTCTCCGAAG ATGTTGATGT GGTCATAAGA
CGGGGATTCC TTGGTTTTCC TGATGATCAT CTCGGCAGTA AACGCCGGGA AAAACTCCGA
AAGGAATGCG GTAGGCGCAT ACAGGAAGAT TTGAAGCCGA CGTTTGAATC TCGATTAAGA
GAAGTGCTCC CTGATGATCT GGAATGGTCT CTCACATTGG AGGATGCAAT TGGAGATCCT
GATCGAAGCA TGTTTTTTCA GTATCCGACT ATTTTCAAAA CCGAAATCAG TTACTTAAAA
CGCATTGTCA AAGTTGAACT GGGTGCTCGG TCTGAAACCG AACCGATTGA AGATCGCCCC
ATACAATCCT ACTTAGCCGA GGCATTTCCT AATATTTTCG GGAACAGCAC ATTTTTTATC
AGGACAGTTA CTGCACGTCG GACATTTTGG GAAAAAGCGA TGCTCTTGCA TGAGGAGACC
TTTCGACCCA CAGACAAGCC AAGAAAGGGC AGACTGTCAC GCCATTACTA CGACCTGTGG
TGCATGATAA ACAAAAGCAT TGGGAAAGAA GCTCTGGCCG ATGTGGAACT ATTTGATCGT
GTTGCTCAGC ACCGAAAAAT TTTTTTTAGG CAGAGTTGGG TAAACTATGA AACCCTCAAA
AAAGGGAGCC TGCGATTGGT GCCTCCGCCG GAGCAAATGG CTGAGTGGCG AAAGGATTAT
GAGGCAATGC GGGAGGACAT GTTCTTTGAT GATCCACCTC CCTTTGACCA ATTATTGGAA
GTTATCCTAG CTTTTGAAGA GGAATTCAAC CGATAA
 
Protein sequence
MERFYGISAE KQRKFCEEAK SIVGYPPITI EKDFWVCFIL RELFGLQNWG QHLAFKGGTS 
LSKGWQLISR FSEDVDVVIR RGFLGFPDDH LGSKRREKLR KECGRRIQED LKPTFESRLR
EVLPDDLEWS LTLEDAIGDP DRSMFFQYPT IFKTEISYLK RIVKVELGAR SETEPIEDRP
IQSYLAEAFP NIFGNSTFFI RTVTARRTFW EKAMLLHEET FRPTDKPRKG RLSRHYYDLW
CMINKSIGKE ALADVELFDR VAQHRKIFFR QSWVNYETLK KGSLRLVPPP EQMAEWRKDY
EAMREDMFFD DPPPFDQLLE VILAFEEEFN R