| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0216 |
|---|
| Symbol | |
|---|
| ID | 4461479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 252991 |
|---|
| End bp | 253632 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639700970 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_844352 |
|---|
| Protein GI | 116747665 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.263297 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATGCA GCAAATGTGG TTTCGTAAGC TTCGATCACC AGTCCGAATG CAAGGGCTGC
GGCGCGAGCC TGGCTGCTGT GCGGGATGAG CTGGGTCTTC CGCACGTCAA ATCCGCGCTC
CCCTTTACCC TCGGATCGTT GACCAAGGAG ATCGATACGA AACAGACCGA GGTGAAGGGG
CTTGTTTTGG ACGAACCCTA TGACTCGACA CTCCCGGACA TCGAGTTCGA CGATGAATAC
CAGGGAGGTT CCAAGCCGAG CGCGGAACAG GCTCCGGCGC CTCCATCCGG GGGCGCGGCG
CGGGTTTCCA TGGAGGATCT GATCTCCCGC TCCGATGCGG GTGCGGATAA GGAAGACAGT
TTCTCGCTCG ATCTGGACTT CCTCCAGACC GAGGAGCCGA CGTCCCGGGC GCAGGCCCCG
GCCGCCAGTG CTGTGGATGC GGGCGCGGGG AAAGGGAATG TCGGCCGGTA TATGCCGCAG
GCGGCCCCGA GCCCGGCTGC CCCCGCGAAG CCTTCGGGGA CGGCCGACGA TAGCCTGGTG
ATCGAGCTCT CCGACAGCGA TCTTGAAAAC ATTCTCGAAG ACCTGAAAGA TGTGCCGCCC
GACCCGCCGC ATCCCGGCAA GGGCAGGGCA AAAATTTCTT GA
|
|---|
| Protein sequence | MRCSKCGFVS FDHQSECKGC GASLAAVRDE LGLPHVKSAL PFTLGSLTKE IDTKQTEVKG
LVLDEPYDST LPDIEFDDEY QGGSKPSAEQ APAPPSGGAA RVSMEDLISR SDAGADKEDS
FSLDLDFLQT EEPTSRAQAP AASAVDAGAG KGNVGRYMPQ AAPSPAAPAK PSGTADDSLV
IELSDSDLEN ILEDLKDVPP DPPHPGKGRA KIS
|
|---|
| |