| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0207 |
|---|
| Symbol | |
|---|
| ID | 4461470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 239453 |
|---|
| End bp | 241411 |
|---|
| Gene Length | 1959 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639700961 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| Protein accession | YP_844343 |
|---|
| Protein GI | 116747656 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.306376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.261941 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAT TGCTTAAAGA CCCGGTATTG TTGGCCGTAG TCATGGGAGC GACGCTTCCA
TTTCTGGCCA TGGCGGTGAT TCTGATCTTT ACGCGCCATA ACCCGCGCCT TTCGAGCTTC
ATCTCCATCG GCGCGGTGAC CGTTTCCGTC TGCGCGGCGC TTTATCTCCT CTACAAGCTG
CATGGGGCCG GCCGGCCCGT TCAATATCAG ACCGAATGGC TTTCATCGGA CACGCTGGTC
GTTCCGTTCG GATACCTGCT GGACCCCCTG AGCCTCCTGA TGCTCGCCAT CGTGGCGTGC
ATCAGTTTCC TCGTGCAGGT CTATTCCATC GGGTACATGG CGGGGGACAC CGGCTACAGC
CGCTACTACG CCTTTCAGTC CCTGTTCGCA TGGGCCATGA TGAACATGGT GATCGCTCCG
GGCATGCTCC AGTTGTTCAT CTTCTGGGAA CTGGTCGGGT TGGCGTCCTA CCTCCTGATC
GGCTTTTACT ACGACAAGGA AAGCGCCTCC CAGGCCGGCA AGAAGGCTTT CGTGATGACC
CGCCTGGGCG ATCTCGGATT CTTCCTGGGC CTGATCGTTC TGACGCTCGG TTTCGGCAAC
CTCGGGATCC TGGACCTGAA TGAGGCCGCT CGGACGCACC AGATCTCGCA ACTGCTCATG
ACCGTTTCCG CTTTGCTCAT CTTTGGGGGC GTGATCGGCA AAAGCGCTCA ATTCCCGCTC
CTCACCTGGT TGCCCGACGC GATGGAAGGT CCCACTCCGG TCAGCGCGCT GCTCCACTCC
GCGACGATGG TGGCCGCGGG CGTGTATATG TTCAGCCGGA TTTTTCCGCT TTTTGCGGCA
TCTCCCGATG CAATGGCCAT GGCCCTTGCC ATCGGCACGG CGACAATGCT GCTTTCCTCG
ACCATGGCCA TGGTCACCTA CGACATCAAA CAGGTCTGGG CCTATTCCAC CATCAGTCAA
CTGGGGTTCA TGGTCATGGC TCTGGCTGCC GGCGGGTATT TCGCCGGAGT CTTTCACCTC
ACCACCCACG CGGGCTTCAA AGCCCTGCTG TTTCTTTGTT CCGGCATCTT CATTCACGAG
TATCACAGCA ACGACATGAG GCTGATCGGA AAGGGCGGAG GGCGACGGTT GGTGATCCCG
ATGGCGTGCA TGACCGTCGG GGCGCTGGCG TTGTCCGGTC TGCCTCCGTT CTCCGGTTTT
TTCAGCAAGG AGGCCATCCT GGGCGTGCTC GCCGCCCATC CCAATAAACT CTGGCTTGCG
GCGGGGCTGC TCGGCGCCCT GATGACCGCC TATTACAGCT TCCGGCTGAT CTTCTTCATT
CTTTTCCCCC GGGGTGGAAT CGAAACACCT CACGGTCACT CGCAAGGTCA CGAACATGAG
GCGCACGCGG GCGGGCACGG CGGGCTGATT TTCTGGGCCA TGGCGGTACC CGTGATGATC
CTGGCGACCC TTACCCTGTT CCTCGGCTTC TTCCAGAGTT CCATCGAGCA TTTCCTGACC
GGGAATGCCG GCCGGCTTGC GGCCGCCGCC CACGGGGCGG CCCAGGAAGC AGGAAAGGCG
GCCCATGACG GCCACGGAGC CGGGCACTAC GTCTTGCTCG TGTTCGCGGT CTGCATGGCT
TTGGGCGGGC TTGGCTGGGC CTGGGTGGAG TTCGGCCGGA AGAAGGCCGC GCAGGTAGGT
TTTCTCGGCC GGTTTCCCAG GATGTGGGAT TTGTTTGCGG AACGCTGGTA CCTGGATCGA
CTGTATCGGC AGTTCCTGGA CAGAGGGATT TACGCCGGGA TAACGAGCCT CTTCACCCGG
AACGACCGGC GCGTGATCGA CGGGGGCATC GACGGCCTGT GTTTCTTTAC GGTGACCGGC
GGGCGATTGT TCAGTTTTCT CCAGTCGGGC ATGCTGCAGT ACAACCTGTT GGTCATGATC
GGCGGGGTAG GTGTCGTGGT TCTCCTGTTC CTCGTGTAG
|
|---|
| Protein sequence | MTELLKDPVL LAVVMGATLP FLAMAVILIF TRHNPRLSSF ISIGAVTVSV CAALYLLYKL
HGAGRPVQYQ TEWLSSDTLV VPFGYLLDPL SLLMLAIVAC ISFLVQVYSI GYMAGDTGYS
RYYAFQSLFA WAMMNMVIAP GMLQLFIFWE LVGLASYLLI GFYYDKESAS QAGKKAFVMT
RLGDLGFFLG LIVLTLGFGN LGILDLNEAA RTHQISQLLM TVSALLIFGG VIGKSAQFPL
LTWLPDAMEG PTPVSALLHS ATMVAAGVYM FSRIFPLFAA SPDAMAMALA IGTATMLLSS
TMAMVTYDIK QVWAYSTISQ LGFMVMALAA GGYFAGVFHL TTHAGFKALL FLCSGIFIHE
YHSNDMRLIG KGGGRRLVIP MACMTVGALA LSGLPPFSGF FSKEAILGVL AAHPNKLWLA
AGLLGALMTA YYSFRLIFFI LFPRGGIETP HGHSQGHEHE AHAGGHGGLI FWAMAVPVMI
LATLTLFLGF FQSSIEHFLT GNAGRLAAAA HGAAQEAGKA AHDGHGAGHY VLLVFAVCMA
LGGLGWAWVE FGRKKAAQVG FLGRFPRMWD LFAERWYLDR LYRQFLDRGI YAGITSLFTR
NDRRVIDGGI DGLCFFTVTG GRLFSFLQSG MLQYNLLVMI GGVGVVVLLF LV
|
|---|
| |