Gene Sfum_0203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0203 
Symbol 
ID4461466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp237139 
End bp238128 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content59% 
IMG OID639700957 
Productrespiratory-chain NADH dehydrogenase, subunit 1 
Protein accessionYP_844339 
Protein GI116747652 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.746542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.677183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACATG AAGGTGGAAC GGAGTGGGTG CGGCTGATCG TGGGCCTCGT GATCATCCTG 
GCTTTTTCTC AGCTCAATGC CCTGTTTCTG GTCTGGCTGG AACGGAAAGT GGCTGGGCGC
ATCCAACTCA GGCCGGGCCC CATGGAGGTC GGTCCGCACG GCCTGCTGCA AACGATCATG
GACGGCATCA AGCTGGTCGG CAAGGAGTTG ATCACTCCGC GGTCGGTGGA CAGGAAGCTC
TTCATCTTGG CGCCGGTCCT GGTCTTCATG CCGGTCCTGG TGGGATTCCT CGTGCTTCCT
TTCGGACCCG GGCTGATCCT GCGCGACATG AACGTCGGCA TCCTCCTGAT TTTCTCCTTT
TCGACCTTCA CCGTGCTGGC CATTCTTGCC GGCGGATGGG CTTCCAACAA CAAGTACGCT
CTGCTCGGCG CGATCCGGTC GGTGGGGCAG AACGTCGCCT ACGAAATTCC CCTGTTGTTG
ACGGTCATGA GTGTCGTGCT GATGGTGAAT TCCATGCGTT TCTCGGAAAT CGTGGCAGCG
CAGGGGCGTG TCTGGTTCAT TTTCCTGCAA CCCGTGGCGG GGTTGCTCTA CCTGATTTGC
GCGACCGCGG AGACCAACCG CGCGCCGTTC GACATCCCCG AAGCCGAATC CGAGCTCGTG
GCGGGTTTCC ACACCGAGTA CACCGGGATG CGGTTCGGGC TCTTCTTCCT GGCGGAATAC
ACGAACATGT TCATTGTCAC CGCCGTTGCC ACCAGCCTGT TCTTCGGCGG GTGGCACGGC
CCGTTCGGCT TCGACTTCGG GCTTCCCGGG GTGGTGTGGT TCCTGATCAA GACTTACGTG
CTCATTTTCG TGATCATGTG GGTGCGCTGG ACTTTTCCCA GGATCCGCTT CGACCAGCTC
ATGAATTTCT CCTGGAAATT CCTGATTCCG GTGAGTCTCG TGAACCTGGT CGTGACTGCC
GTGGTCCTGA AACTGATTGA TCTGAACTGA
 
Protein sequence
MGHEGGTEWV RLIVGLVIIL AFSQLNALFL VWLERKVAGR IQLRPGPMEV GPHGLLQTIM 
DGIKLVGKEL ITPRSVDRKL FILAPVLVFM PVLVGFLVLP FGPGLILRDM NVGILLIFSF
STFTVLAILA GGWASNNKYA LLGAIRSVGQ NVAYEIPLLL TVMSVVLMVN SMRFSEIVAA
QGRVWFIFLQ PVAGLLYLIC ATAETNRAPF DIPEAESELV AGFHTEYTGM RFGLFFLAEY
TNMFIVTAVA TSLFFGGWHG PFGFDFGLPG VVWFLIKTYV LIFVIMWVRW TFPRIRFDQL
MNFSWKFLIP VSLVNLVVTA VVLKLIDLN