| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0201 |
|---|
| Symbol | |
|---|
| ID | 4461464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 235487 |
|---|
| End bp | 235960 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639700955 |
|---|
| Product | NADH dehydrogenase (ubiquinone), 30 kDa subunit |
|---|
| Protein accession | YP_844337 |
|---|
| Protein GI | 116747650 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.60118 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGA CAGCCGATTT TTGCGGGGAA TTGCGTGGTA TTTTGGGCGG CGAGGCGATT
TCTGCGGACG ACGGGTACCG GACCGGGGTC GCTTTTTCCG TGAGGGTTCC GATGGAACGG
CTTCAGGAGG TCGCGGCGGC CTGCAACGCC GGCGGATTCT ACCTGGAAAC GATCACCGCC
CTCGATTTCA AGGACACCAA GGAACTCGTC TACCACTTCA ACTGCTACGA ACCCGGGTCC
CGTTTCGCCC TGCGGGTCCT GTGCGGCCAT GACCAAACCC CTCCGACGAT CAGCACGATT
TTCGCCTCCG CCGGATGGCT GGAACGGGAA GTCCATGAAT TCTTCGGCAT CCAGTTCGCC
GGCAGCTTCG ATCTCAGGCC GCTCCTGCTG CCTGAGGACG CGGAATTCCA TCCGCTCAGG
AAGACCTTCG GCATTGTAGC CGCCTATCGC AAACGGGATG AAATCTATGC CTAA
|
|---|
| Protein sequence | MSKTADFCGE LRGILGGEAI SADDGYRTGV AFSVRVPMER LQEVAAACNA GGFYLETITA
LDFKDTKELV YHFNCYEPGS RFALRVLCGH DQTPPTISTI FASAGWLERE VHEFFGIQFA
GSFDLRPLLL PEDAEFHPLR KTFGIVAAYR KRDEIYA
|
|---|
| |