Gene Sfum_0200 details

Gene Information

• Locus tag: Sfum_0200
• ID: 4461550
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Syntrophobacter fumaroxidans MPOB
• Kingdom: Bacteria
• Replicon accession: NC_008554
• Strand: +
• Start bp: 234957
• End bp: 235487
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 639700954
• Product: NADH-quinone oxidoreductase, B subunit
• Protein accession: YP_844336
• Protein GI: 116747649
• COG category: [C] Energy production and conversion
• COG ID: [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases
• TIGRFAM ID: [TIGR01957] NADH-quinone oxidoreductase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.625905
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGAAGAGC AGAACCGAGT AGCACCGGAA GAGCCGGCCA TCCAATTCGC CGTTCTGGAA 
GATATCCTCA ATCTGGCGAG AGCCAACTCT CTGTGGCCCA TGACTTTCGG CCTGGCGTGC 
TGTGCCATCG AGATGATGGC CGCCGGGGCT TCCCGTTTTG ACCTGGATCG TTTCGGAGCG 
GGTGTTTTCC GGCCTTCACC CCGCCAATCC GACTTGATGA TCGTGGCGGG AACGATCTCC 
AAGAAGATGG GGCCGGCCGT TCAGATGCTG TGGGATCAGA TGCCCAACCC CAAGTGGTGC 
ATCGCCATGG GCAACTGTGC CATCTCCGGA GGGCCGTTCG AGTACGAAGG GCAGTACGCC 
ATCGTTCCCG GCGCCCATCT GATCGTACCG GTGGACATTT TCATTCCCGG GTGTCCGCCT 
CGGCCGGAGG CGCTCATTCA GGGGTTTTTG GCCTTGGGGG ACAAGATAAC CGGGGGCGAG 
CACAGAAACT ACCTGAGACG ATTTCATCGC CGTGGAGGAA CGAGGAAGTG A 

 

Protein sequence

MEEQNRVAPE EPAIQFAVLE DILNLARANS LWPMTFGLAC CAIEMMAAGA SRFDLDRFGA 
GVFRPSPRQS DLMIVAGTIS KKMGPAVQML WDQMPNPKWC IAMGNCAISG GPFEYEGQYA 
IVPGAHLIVP VDIFIPGCPP RPEALIQGFL ALGDKITGGE HRNYLRRFHR RGGTRK