| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0192 |
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| Symbol | valS |
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| ID | 4461542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 227493 |
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| End bp | 230171 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639700947 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_844329 |
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| Protein GI | 116747642 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.209132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.584595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG GCATTCTGCC CAAGGCATAC GCGTTTGATG AAGTGGAATC CTACTGGTAC
GACTTCTGGG AAAAGCACGG CTATTTTCAC GCGGACGAAC GGAGTTCCAA ACCACCCTTT
TGCATCGTCA TCCCACCGCC CAACGTAACC GGGCAACTTC ACATGGGCCA TGCCCTCAAC
AACACGCTCC AGGATATCCT CTCGCGGTAT AAACGGCTGA AGGGATTCGA AGTGCTCTGG
CTGCCGGGAA CGGACCATGC CGGGATCGCG ACGCAGAACG TCGTCGAACG TCAGCTCGCG
GCCGAAGGGT TGAACCGGTA CGAACTGGGA CGCGACGCTT TCCAGGAACG GGTTTGGACT
TGGAAAGCAA AGTACGGCGG CATCATCATC AACCAGTTGA AACGGCTGGG GGCGTCGTGC
GATTGGGAGC GGGAACGGTT CACCATGGAT GAGGGCCTCT CGCGCGCGGT TCGGGAAGTT
TTCGTCAAGC TGTACGAGGA AGGGCTCATC TATCGCGGCA AGCGGATGAT CAACTGGTGC
CCCCGGTGCA TGACCGCCCT GGCCAACATT GAAGTGGACG GCGAGGAGAC CGACGGATTT
CTCTATCATC TCAAATACCC CCTGCTCGAC GGAACCGGAG CGCTGGTGGT TGCGACGACG
CGGCCGGAGA CCATGCTCGG GGATACCGCG GTGGCGGTGC ATCCGGAAGA TTCGCGGTAT
GCGGCATATG TCGGCCGCAA GGTGCTGCTT CCCGTCATGA AGCGTGAAAT CCCCGTTATT
GCCGATGCTT ATGTGGACCG TGAATTCGGA ACCGGGGCGC TCAAAGTCAC CCCGGCGCAT
GATTTCAACG ACTTCGAGCT TGCCCGCAAA CACGGCCTGC AACTGGTCCA GGTCATCGCC
GAGGACGGCC GGATGACCGA GGAGGCCGGC ACTTACGCCG GGATGGACCG GTACGAATGC
CGCAGAAAGA TCCTCAAGGA ACTGGAACAC GGCGGCTTCC TGGTCAAGGT CGAGAACTAT
CATCACCGGG TCGGACACTG CTACCGCTGC AAGAGCGTCG TGGAACCGAT GCAGTCCCTG
CAGTGGTTCG TTTCCACGAG GCCCCTTGCC GATCGCGCCA TGAAGGCCGT TCGCGACGGC
AGCACCGCCA TCGTTCCCGC CAAGTGGGAG AAGGACTATT TCATCTGGCT GGAGAATCTC
GAAGACTGGT GCGTCAGCAG GCAGATCTGG TGGGGACACC GCATTCCGGC CTGGTACTGC
CGGGACTGCG GGGAGCTGAT CGTGGCGCGC GAGGAGCCGC GCGAGTGTTC CATGTGCAAG
GGCACGCGGC TCGAACAGGA TTCCGACGTG CTGGACACCT GGTTCAGCTC CGGTCTCTGG
CCGTTTTCCA CTCTGGGCTG GCCGGACCGG ACTCCCGAGC TCGACAAGTT CTATCCCACG
TCCGTCCTGG TCACCGCCTT CGACATTCTG TTCTTCTGGG TGGCGCGGAT GATGATGATG
GGCATCCACG CCATGCACGA GGTGCCGTTC CGGGAAGTCT ACATCCATGC GCTCGTTCGG
GACGCGCAGG GCCAGAAGAT GAGCAAATCG AAGGGGAACG TCATCGATCC CCTGGTGATG
ATGGAGCGCT ACGGAACGGA TGCGTTCCGG TTCACGCTGG CCGCCTTTGC CGTTCAGGGG
CGCGACGTCA AGCTTTCGGA AGAGCGGATC GAAGGGTACA AACACTTCGT CAACAAGATA
TGGAATGCCG CAAGGCTGCT TCTCATGAAC CTCCAGGGGG AAGCAAGCCT GGAAGAAATC
CCGTCCAAAC CCGTGCAGCT CATGCATCGC TGGATTCTCA GCCGCCTGCA GCGCGTTGTC
GGCGAAGTGG ACTCCGCCCT GGAAAACTAT CATTTCAACC AGTATGCCAA TGTACTGTAT
CAATTCCTGT GGCGGGAGTA CTGCGACTGG TACCTTGAAA TGATCAAACC CGATCTGTAC
GGGGAGGACG AAGCCGCCGG GAGGCTGGCG AAGTCCATAT CGGTTCGGGT TCTCGAGCAG
ATCCTGGTGC TTCTGCACCC GGTCATGCCC TTCGTGACCG AGGAAATCTA TCAGAAGCTG
CCCGGAATTA CCGGCAGCAT CATGAAAGCC TCCTATCCGG CGGTGCGGCC GGAATGGATC
GACTCCGAAG CCGAACGGGC CATGGAAATC ATCATGGGCG TGGTCAGCGG CATCAGAAAT
ATCCGTGGGG AGATGAACGT CCCGCCGGCC ACCAGGGTCG AGGCGGTGTG CCTGTGTGAA
AACAGCGCCG CAAAGGAGCT TCTCGATGCG CATGCAGTCA CGGTGATCGA CCTGGGCCGC
CTCTCGGAGC TGAAAGTCGG AATCGCGGGC GAGATGCAAA AGCCGGCGCA GGCGGCGGGA
GCCGTTATAC CCGGCGTGGA AGTGCACGTC GTGCTGAAGG ACATCCTGGA CTTCGAGAGC
GAATCCAAGC GTCTTCGCAA GGAACTGGCA AAGCTCGAAA AGGAATTCGG CATCACCCGG
ATGAAACTGT CCAACGAGGA CTTTCTGGGG AAGGCTCCAC CGGAAGTCAT CGAAAAAGAA
CGCGAAAAGA GCGGCCGGCT CGGCGAGAAG ATCGAAAAAC TCAGCCGTCA GTCCGGCCTT
ATCGACGGAC TGCGGGCGAG CGCCGCCGCG GGGGAGTAA
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| Protein sequence | MSEGILPKAY AFDEVESYWY DFWEKHGYFH ADERSSKPPF CIVIPPPNVT GQLHMGHALN
NTLQDILSRY KRLKGFEVLW LPGTDHAGIA TQNVVERQLA AEGLNRYELG RDAFQERVWT
WKAKYGGIII NQLKRLGASC DWERERFTMD EGLSRAVREV FVKLYEEGLI YRGKRMINWC
PRCMTALANI EVDGEETDGF LYHLKYPLLD GTGALVVATT RPETMLGDTA VAVHPEDSRY
AAYVGRKVLL PVMKREIPVI ADAYVDREFG TGALKVTPAH DFNDFELARK HGLQLVQVIA
EDGRMTEEAG TYAGMDRYEC RRKILKELEH GGFLVKVENY HHRVGHCYRC KSVVEPMQSL
QWFVSTRPLA DRAMKAVRDG STAIVPAKWE KDYFIWLENL EDWCVSRQIW WGHRIPAWYC
RDCGELIVAR EEPRECSMCK GTRLEQDSDV LDTWFSSGLW PFSTLGWPDR TPELDKFYPT
SVLVTAFDIL FFWVARMMMM GIHAMHEVPF REVYIHALVR DAQGQKMSKS KGNVIDPLVM
MERYGTDAFR FTLAAFAVQG RDVKLSEERI EGYKHFVNKI WNAARLLLMN LQGEASLEEI
PSKPVQLMHR WILSRLQRVV GEVDSALENY HFNQYANVLY QFLWREYCDW YLEMIKPDLY
GEDEAAGRLA KSISVRVLEQ ILVLLHPVMP FVTEEIYQKL PGITGSIMKA SYPAVRPEWI
DSEAERAMEI IMGVVSGIRN IRGEMNVPPA TRVEAVCLCE NSAAKELLDA HAVTVIDLGR
LSELKVGIAG EMQKPAQAAG AVIPGVEVHV VLKDILDFES ESKRLRKELA KLEKEFGITR
MKLSNEDFLG KAPPEVIEKE REKSGRLGEK IEKLSRQSGL IDGLRASAAA GE
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