Gene Sfum_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0186 
Symbol 
ID4461536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp220855 
End bp222069 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content56% 
IMG OID639700941 
Productglycosyl transferase family protein 
Protein accessionYP_844323 
Protein GI116747636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.236135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.752498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTT ATGAAGAAAA TCCGCAGCAT ATCACGAAAG CCGATCTCGT GGTGGGAATC 
CCTTCGTTCA ACGAAGCGGC GAGTATCGGG CATACCGTGC GGGTGGTCGA ACAGGGGTTG
AAGGAGTATT TCGGTTCTCT GAACACCGTG ATCGTGAACT GTGACAACCA CTCCACCGAC
GGCACAAAAG AACAATTTTT CGCCTCCCCT GGAGAAATTC CCCGCATCTA CCTGTCAACC
GCTCCGGGGA CCAGCGGCAA AGGCAACAAC CTGCGCAACC TCTTCGAGAA AGTTCGTGAA
CTGAGCGCGT CGGTGGTGGT GGTGGTTGAA TCCGATGTTC GAAATATCGC TCCCTATTGG
ATCAGAAATC TCGGGGAGCC CATCGTCAGG GGAGCCGGTT ACGCCGTGCC CCTTTACGTT
CGCCACAAGT ACGAGGCCAC GCTTACGAGC TCGCTCATAT ACCCTTTTTT GAGGTGCCTT
TACGGGCGGC GGATCCGGCA GCCCAATGTC GGGGATTTCG GATTCAAGGG GCAACTGGTG
GACAAGTTCC TGGATTCGCC TGTCTGGACG GAAGCCGTCC GGCATTTCGG CATCGACATC
TGGATGACCA ATATTGCCCT CAGCTCCCGC GTGCCCATTT GTCAGTCGTT CATGGGGTGC
CCGAAAATTC ACAGGGTCAA GGATCCGTAC GCACATCTCA GAGTGATGTT TCACCAGGTT
TTGAGCACGG TTTTCGACCT GATGTCCGTG TACGCGGACT TCTGGCGCCA GGTGAAATGG
AGCAAACCGG CGGCCCTGTT CGGCACGGAC GCCCACGAAG TCGAAACGCC GATGCCGGTG
GACATACAGC CTGTCAAGCT GCATGAACGT TTCCTGGAAG GGTTCGACAA GTACAGCGGG
ATATGGCAGC GGATTTACGA TCAGACGGTG TTCCCCAAGC TTCAGGAAAT CCGGAGCCTG
GAACCCCAGC ATTTTTCTTT CCCTACGCCG ACCTGGGCCA GGGTCCTGTT TGACGCGGCC
AACGTCTATC GACGTTCCAG CGAGGCCGAG CGGTCCACGC TCCTCGATTC GCTCCTCCCT
CTCTATGTGG GCAAGGTGCT GTCCTTTGTC AAGAAAACCG AGCGGATGTC CCTGCAGCAG
GCGGAGGAGT ACGTGGAGAA CGAATGCGTG ATTTTTGAGG AACATAAACC CTACATGGTA
AAAGTCTGGG AATGA
 
Protein sequence
MAFYEENPQH ITKADLVVGI PSFNEAASIG HTVRVVEQGL KEYFGSLNTV IVNCDNHSTD 
GTKEQFFASP GEIPRIYLST APGTSGKGNN LRNLFEKVRE LSASVVVVVE SDVRNIAPYW
IRNLGEPIVR GAGYAVPLYV RHKYEATLTS SLIYPFLRCL YGRRIRQPNV GDFGFKGQLV
DKFLDSPVWT EAVRHFGIDI WMTNIALSSR VPICQSFMGC PKIHRVKDPY AHLRVMFHQV
LSTVFDLMSV YADFWRQVKW SKPAALFGTD AHEVETPMPV DIQPVKLHER FLEGFDKYSG
IWQRIYDQTV FPKLQEIRSL EPQHFSFPTP TWARVLFDAA NVYRRSSEAE RSTLLDSLLP
LYVGKVLSFV KKTERMSLQQ AEEYVENECV IFEEHKPYMV KVWE