| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0172 |
|---|
| Symbol | |
|---|
| ID | 4461644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 207442 |
|---|
| End bp | 208797 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639700927 |
|---|
| Product | MmgE/PrpD family protein |
|---|
| Protein accession | YP_844309 |
|---|
| Protein GI | 116747622 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAT CACCCCTGCT GAGTCTGAAA CTGGCCGAAT TTGTGGAGGG GTTGCATTAT
GAGGATCTGC CTCGGGAAAC GATCCGCATG GCGCGGCTGG CTTTTCTGGA CTGGCTGGGA
TCGGCCCTGC GCGGCAGCCG CGAACAACCC GCTTTGATGG TCCTGTCCGT GTTGAGTGCC
CAGGGGGGCA CCCCTCAGGC GACTCTGCTT TCCTCGAAGG AAAGAACCTC CGCGCTCAGT
GCCTCCCTGG GCAATGGTGT TGCTTCGCAC ATCATGGAGC TCGACGACGT CCATCGCGCC
TCCATCGTCC ACATTGGGGC ATCCGTCATT CCCGCGGCCC TGGCGGCGGC CGAGATGCTC
CACGCCGATG GCAGGCGGCT GATCGAAGCC ATTGTGACGG GGTACGAAAC GGCGGCCCGG
GTCGGTGAAG CCGTTACCCC CGCCCATTAC TATTTCTTCC ACAACACCGG CACCTGCGGC
ACTTTCGGCG CGTGCGCCGC GGCCGGCAAG CTTCTCGGAC TCGACCGTCG GCAGATGGTC
TGGGCGCTCG GCAACGCGGG AACCCAGGCC GCGGGACTCT GGGAATTCCT CGTCGACGGG
GCCATGTCCA AACACCTGCA CCCGGGAAAG GCCGCGCAGA ATGGACTGCT TGCGGCACTG
CTCGCCGGGG AGGGGTTCAC CGGAGCCTCC GCCATCCTCG AGGGCGACAG AGGATTCTGC
CGGGCCATGG CTTCAGAATT CAACCTCGCC CGCATCACTG ACGGTCTCGG CAAGCCGCCA
TACAAGGTCG AAGAGAATTC CTTCAAGATT CATTCGTCCT GCCGGCACAC CCATCCCGCC
ATCGACGTGA CGATCGATCT GGCGGCGCGT CACGCCATCG ATCCTTCCCT GGTGTCGGGA
ATCGTCGTTC GCACCTATCG CACCGCCGTA CAGATAACGG ATAACCCCGC TCCCGGGACG
ATCTATGCCG CCAAGTTCAG TCTCCCCTTC TGCGTGGCGC TGGCTCTGGT CCGCGGCTCG
TGCGGGATCG AAGATTTCAG CGAAGCCAAC CTCCACGATG CGCAGATTCG CGACCTCATG
GGTCGGGTAC GGCTCGTCGT GGATGATGAC CTGGACGCAG CCCATCCGGC AAAATGGGCG
GTGGCCGTTG AGATCACCAC CCGAACGCGG GAAACGTACT CCGGTCGAAC CGATTTTCCC
CGCGGAGACC CCGAGAATCC GGCGGATGAG GCGGAGTTGA TCGCCAAGTT CCGGCGCATG
GCCATCTCCT CCCGGGACGG GCAGACCGTG GACCGCCTGC TTGAAAGCGT CATGAATCTC
GAAAACGTCG AGGATTGCGC GCGACTTCCG CTTTAG
|
|---|
| Protein sequence | MGKSPLLSLK LAEFVEGLHY EDLPRETIRM ARLAFLDWLG SALRGSREQP ALMVLSVLSA
QGGTPQATLL SSKERTSALS ASLGNGVASH IMELDDVHRA SIVHIGASVI PAALAAAEML
HADGRRLIEA IVTGYETAAR VGEAVTPAHY YFFHNTGTCG TFGACAAAGK LLGLDRRQMV
WALGNAGTQA AGLWEFLVDG AMSKHLHPGK AAQNGLLAAL LAGEGFTGAS AILEGDRGFC
RAMASEFNLA RITDGLGKPP YKVEENSFKI HSSCRHTHPA IDVTIDLAAR HAIDPSLVSG
IVVRTYRTAV QITDNPAPGT IYAAKFSLPF CVALALVRGS CGIEDFSEAN LHDAQIRDLM
GRVRLVVDDD LDAAHPAKWA VAVEITTRTR ETYSGRTDFP RGDPENPADE AELIAKFRRM
AISSRDGQTV DRLLESVMNL ENVEDCARLP L
|
|---|
| |