Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0171 |
Symbol | |
ID | 4461643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 206485 |
End bp | 206883 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639700926 |
Product | signal transduction protein |
Protein accession | YP_844308 |
Protein GI | 116747621 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.900499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.567274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGATC TCAAAGCCGG AAGCGTGATG ACCAAGCCGG TCGTATTTGC GAGAAAAGAC ACCACGGCAA GGGACATAAC CGTCCAACTC CTCAATGGTC TTTACAGTGG AATGCCCATC ACGGACGAGG AAGACCAGGT TATCGGCATC GTGACGGAGC TCGACCTGCT GGAAGCCGCG AGCGAAGGCA GGGACCTCGG TGAGCTCACG GCGGAGGAGG TGATGACCAA AGACCCCTTC ACCACTGACA TCGACACCCC CATCAGCGAA GTGATCAACC TGATGCGGGA ATACAACATC ATCCGTCTGC CCGTCACCGA GCAGGGTGCT CTGGTGGGAA TCGTCTCCCG GTGCGACATC CTCCGAAAGA TCATCGATCC GGCTCAGTAC GTTTTGTAA
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Protein sequence | MKDLKAGSVM TKPVVFARKD TTARDITVQL LNGLYSGMPI TDEEDQVIGI VTELDLLEAA SEGRDLGELT AEEVMTKDPF TTDIDTPISE VINLMREYNI IRLPVTEQGA LVGIVSRCDI LRKIIDPAQY VL
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