Gene Sfum_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0171 
Symbol 
ID4461643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp206485 
End bp206883 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content56% 
IMG OID639700926 
Productsignal transduction protein 
Protein accessionYP_844308 
Protein GI116747621 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.900499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.567274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGATC TCAAAGCCGG AAGCGTGATG ACCAAGCCGG TCGTATTTGC GAGAAAAGAC 
ACCACGGCAA GGGACATAAC CGTCCAACTC CTCAATGGTC TTTACAGTGG AATGCCCATC
ACGGACGAGG AAGACCAGGT TATCGGCATC GTGACGGAGC TCGACCTGCT GGAAGCCGCG
AGCGAAGGCA GGGACCTCGG TGAGCTCACG GCGGAGGAGG TGATGACCAA AGACCCCTTC
ACCACTGACA TCGACACCCC CATCAGCGAA GTGATCAACC TGATGCGGGA ATACAACATC
ATCCGTCTGC CCGTCACCGA GCAGGGTGCT CTGGTGGGAA TCGTCTCCCG GTGCGACATC
CTCCGAAAGA TCATCGATCC GGCTCAGTAC GTTTTGTAA
 
Protein sequence
MKDLKAGSVM TKPVVFARKD TTARDITVQL LNGLYSGMPI TDEEDQVIGI VTELDLLEAA 
SEGRDLGELT AEEVMTKDPF TTDIDTPISE VINLMREYNI IRLPVTEQGA LVGIVSRCDI
LRKIIDPAQY VL