Gene Sfum_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0169 
Symbol 
ID4461641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp203358 
End bp204476 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content61% 
IMG OID639700924 
Productpeptidase M24 
Protein accessionYP_844306 
Protein GI116747619 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.871292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA GCATGTTCGA TGTGAGATTG GAACGGTTCC GGAAGCTGTG CGGAGAGGAA 
GGTCTGGACG CCTTTCTCGT CGCCAACCCG GAAAATCGCT ACTACCTGAG CGGATACGAG
GCGGATGACA TGCATCTGAC CGAAAGCTCG GGCTTCCTTC TGATTACCCC TGACCGCCGA
TACCTGCTGA CCGATCCACG ATACGAGGAG GCGGCCAGGA AAGAAGCACC GGGTTTTGCG
GTGCGGATAT ACACACAGGG ACTCTCCCAG GTGCTTGCGG AGCTTCTTCC CGAAATTCGC
CCGGAGCGCC TCGGAGCGGA AAGCTCGTAC CTGACCTGGA GCAGGTACAA GGATGTCGAG
GAACAGCTCC GCAAGGCCAA TCCTTCGGCC GTCGTCCTGG GTTTCGAGGG ATTGGTCGAA
CGGCTGCGGG TGATCAAGGA GCCCATGGAA ATCGAGTGGA TCAAGGCATC CCTGCGCCTG
ACGGAGGACG CTTTGGTGGC GGTGTGGAAC GAATTGGCGC CGGGGCGCAA GGAAAAGGAC
ATCGCCTGGC GTATCGAGCG TTACATCCGT GAAGGGGGAG GAGAGGCTGT TTCATTTCCG
CCCATTGTAG CGGCAGGTCC GAATGGAGCT CTTCCCCATG CCGTTCCCGG CGAACGCAGA
ATCGCAAAGG GGGACTCGCT CATCCTCGAT CTCGGATCGA AACTCCGCCA CTACTGTTCC
GATATGACCA GAACCTGGAT CGCAGGCAAC CCCGAACCGA AGCTGGCGGA GATCTACCGG
GTCGTCCGGG AGGCGCAGTT GGCCGCGCAG GACCAACTGC GGGCAGGAAT CGATTCGGTG
GAAGTGGACC GGGTGGCGCG CGACCTGATC GCGAAGGCCG GATACGGCGA ATACTTCGGC
CACGGGCTCG GCCACGGGGT GGGCCTTGCA GTCCATGAGG GGCCGAGTTT GCGGAGATTC
CACGGGACAA TACTCGAAGA AAACATGGTG GTCACCGTTG AGCCCGGGAT CTATCTCCCC
GGCTATGGGG GCGTCAGGCT GGAAAACATG GTGCGTATCA CCGCCACCGG CTGTGAAGTC
CTTAACACCC GGGATCTCTT CCTCGAGCAG GCCGGGTGA
 
Protein sequence
MSESMFDVRL ERFRKLCGEE GLDAFLVANP ENRYYLSGYE ADDMHLTESS GFLLITPDRR 
YLLTDPRYEE AARKEAPGFA VRIYTQGLSQ VLAELLPEIR PERLGAESSY LTWSRYKDVE
EQLRKANPSA VVLGFEGLVE RLRVIKEPME IEWIKASLRL TEDALVAVWN ELAPGRKEKD
IAWRIERYIR EGGGEAVSFP PIVAAGPNGA LPHAVPGERR IAKGDSLILD LGSKLRHYCS
DMTRTWIAGN PEPKLAEIYR VVREAQLAAQ DQLRAGIDSV EVDRVARDLI AKAGYGEYFG
HGLGHGVGLA VHEGPSLRRF HGTILEENMV VTVEPGIYLP GYGGVRLENM VRITATGCEV
LNTRDLFLEQ AG