Gene Sfum_0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0165 
Symbol 
ID4461446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp198297 
End bp199985 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content60% 
IMG OID639700920 
Producthypothetical protein 
Protein accessionYP_844302 
Protein GI116747615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.729038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGG TTCTGGATCT TGAAGAAAAA CGACTGGGAA AGCTGTCCCC GCGGGACCTT 
GCCGGGGAGC TGATGAAGGT TCCGGCCAAA AAGAGGCTGG AGCTGATCCT GCAACGCAGC
GATGCGGCTT CCGTGGTGGC CGCAATGGAA GTGCGGGATT ACTATTTTTC GGTCATGGAG
ATCGGCCCCG ACGATGCACT GCCGCTTCTG GCCATGGCCA ATGTCGAACA ACTGATCCAT
CTGTTCGATC TCGAATGGTG GGAGGCGGAC CGGGTCAAGG TCTCCAGAGC CATCGAGTGG
CTGGAACGCA TCGAGAAGGC CAATGAACGC AATCTCCTGG AATGGCTTTA CAAAGTCGAT
TTTGAGCTGT TGGTGATCCT TTTCAAGAAA TGGATCCGGG TGCAGTTGAT GCCCGACGAC
ACGGATCCCG TCGAAGCAAG AGAGCAACTC CCGCGCAACA CCATCGATGA CGTGTATTTC
TGGGAAGCGC TCTACCCGCA GTACGAAGAT CTGATCAACC GTATGCTGAG TCTCCTTTTC
GAAGCGCATC CCGGCTTTTA CCGGGAGCTC ATGAACGCCG CGATCTGGGC TTTGGACCCG
GAAATGGAAG AGGACGCCTA CCGGTTTCAC CGCGGCCGGA TGGAAGACCA GGCCATCCCC
GACTTCTACG ATGCGTTGGA GGTCTACCGC AGCATTGGCC TGCGGGAAAT AAAAGCGGAC
AAGCAGCCTT TCGAATCGCC TTCTGAAGAA TTCCGCCCGC CGGCTTTCGC TCTGGCCCTG
ATTCCCGAGG GTGACCTGCT GGATCGCGCG CTTCAGGAAG TGCGTCGGAA GTCGTCGCTC
GATCTGGTTC AGATGGAGCT GGCATCGCTG GCCAACAAAG TGATCGTCGC CGACCGGCTC
CCGCCCGAAG AACCTGAAAT GCTGCGGCGG GCGGTGGAAA AGACGGTGGC CTGCGTCAAC
CTGGGTCTCG AGCTTCTGAG CGACGGAGAC CTTGCCGTTG CCGTCGGCGC GGTCGAAAAC
ATTCATCTCG AGCAGTTGTT TCGTCTGGCC CAGACGGAGA TCGGCAACCT GCGGAACCGC
CTCCTGGAGT TGCTCCGGGG CGGATGGTTG TCCCGGTGGC CGGAGGGGAT CAGGTGCCTG
GATCGGGAAT GGCTGGAACG GGCCGAACTG CTGATTCGCA GGACACCGAA GCTGTTGAGA
CCGGCCTCAA CGGCGGGAGC CCGGAGCGGT GAGGACTTTT TCCGTCGCGA AAGCGACCTG
TTGGAGGCGG GCCGTTTTAT TGAAAGCGTT TCCCGGATCG GGCGGCTGTA CGCCGCACTG
ATGCCCGATC CCGACCTGCT GGATCGCAAA CTTTGGCGCG GCGGTCAGAT AGGAAGCCTT
GCCGAAGTGA CTCTCGGATC GATGATCCTG ACGTCGGCCT CACGCGCCGT TCTCGATGGC
CAGTGGAGGC TCGACCTCAT CCCCTTGGAA CGATGGCCGG TTCTGTTCGG CCTCGCTCGG
CCGGAGACCC TCCGGAAGGT GATTGTCCAA TGGGCGCAAA CGGTTCTTCC GGACAATGAC
CTCCAGGGAG GCGTCCTCGA ATACCTCGAC TCGGTCCTCG TCGCCTTCCG GGAAGACATG
TCGGGCTTCA CCTCTTCCGA TCCTCCCGAT CCTCGGAACG TGCCGCTGCT TCTCTTCACG
CAGGGATAG
 
Protein sequence
MAQVLDLEEK RLGKLSPRDL AGELMKVPAK KRLELILQRS DAASVVAAME VRDYYFSVME 
IGPDDALPLL AMANVEQLIH LFDLEWWEAD RVKVSRAIEW LERIEKANER NLLEWLYKVD
FELLVILFKK WIRVQLMPDD TDPVEAREQL PRNTIDDVYF WEALYPQYED LINRMLSLLF
EAHPGFYREL MNAAIWALDP EMEEDAYRFH RGRMEDQAIP DFYDALEVYR SIGLREIKAD
KQPFESPSEE FRPPAFALAL IPEGDLLDRA LQEVRRKSSL DLVQMELASL ANKVIVADRL
PPEEPEMLRR AVEKTVACVN LGLELLSDGD LAVAVGAVEN IHLEQLFRLA QTEIGNLRNR
LLELLRGGWL SRWPEGIRCL DREWLERAEL LIRRTPKLLR PASTAGARSG EDFFRRESDL
LEAGRFIESV SRIGRLYAAL MPDPDLLDRK LWRGGQIGSL AEVTLGSMIL TSASRAVLDG
QWRLDLIPLE RWPVLFGLAR PETLRKVIVQ WAQTVLPDND LQGGVLEYLD SVLVAFREDM
SGFTSSDPPD PRNVPLLLFT QG