Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0165 |
Symbol | |
ID | 4461446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 198297 |
End bp | 199985 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639700920 |
Product | hypothetical protein |
Protein accession | YP_844302 |
Protein GI | 116747615 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.729038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCAGG TTCTGGATCT TGAAGAAAAA CGACTGGGAA AGCTGTCCCC GCGGGACCTT GCCGGGGAGC TGATGAAGGT TCCGGCCAAA AAGAGGCTGG AGCTGATCCT GCAACGCAGC GATGCGGCTT CCGTGGTGGC CGCAATGGAA GTGCGGGATT ACTATTTTTC GGTCATGGAG ATCGGCCCCG ACGATGCACT GCCGCTTCTG GCCATGGCCA ATGTCGAACA ACTGATCCAT CTGTTCGATC TCGAATGGTG GGAGGCGGAC CGGGTCAAGG TCTCCAGAGC CATCGAGTGG CTGGAACGCA TCGAGAAGGC CAATGAACGC AATCTCCTGG AATGGCTTTA CAAAGTCGAT TTTGAGCTGT TGGTGATCCT TTTCAAGAAA TGGATCCGGG TGCAGTTGAT GCCCGACGAC ACGGATCCCG TCGAAGCAAG AGAGCAACTC CCGCGCAACA CCATCGATGA CGTGTATTTC TGGGAAGCGC TCTACCCGCA GTACGAAGAT CTGATCAACC GTATGCTGAG TCTCCTTTTC GAAGCGCATC CCGGCTTTTA CCGGGAGCTC ATGAACGCCG CGATCTGGGC TTTGGACCCG GAAATGGAAG AGGACGCCTA CCGGTTTCAC CGCGGCCGGA TGGAAGACCA GGCCATCCCC GACTTCTACG ATGCGTTGGA GGTCTACCGC AGCATTGGCC TGCGGGAAAT AAAAGCGGAC AAGCAGCCTT TCGAATCGCC TTCTGAAGAA TTCCGCCCGC CGGCTTTCGC TCTGGCCCTG ATTCCCGAGG GTGACCTGCT GGATCGCGCG CTTCAGGAAG TGCGTCGGAA GTCGTCGCTC GATCTGGTTC AGATGGAGCT GGCATCGCTG GCCAACAAAG TGATCGTCGC CGACCGGCTC CCGCCCGAAG AACCTGAAAT GCTGCGGCGG GCGGTGGAAA AGACGGTGGC CTGCGTCAAC CTGGGTCTCG AGCTTCTGAG CGACGGAGAC CTTGCCGTTG CCGTCGGCGC GGTCGAAAAC ATTCATCTCG AGCAGTTGTT TCGTCTGGCC CAGACGGAGA TCGGCAACCT GCGGAACCGC CTCCTGGAGT TGCTCCGGGG CGGATGGTTG TCCCGGTGGC CGGAGGGGAT CAGGTGCCTG GATCGGGAAT GGCTGGAACG GGCCGAACTG CTGATTCGCA GGACACCGAA GCTGTTGAGA CCGGCCTCAA CGGCGGGAGC CCGGAGCGGT GAGGACTTTT TCCGTCGCGA AAGCGACCTG TTGGAGGCGG GCCGTTTTAT TGAAAGCGTT TCCCGGATCG GGCGGCTGTA CGCCGCACTG ATGCCCGATC CCGACCTGCT GGATCGCAAA CTTTGGCGCG GCGGTCAGAT AGGAAGCCTT GCCGAAGTGA CTCTCGGATC GATGATCCTG ACGTCGGCCT CACGCGCCGT TCTCGATGGC CAGTGGAGGC TCGACCTCAT CCCCTTGGAA CGATGGCCGG TTCTGTTCGG CCTCGCTCGG CCGGAGACCC TCCGGAAGGT GATTGTCCAA TGGGCGCAAA CGGTTCTTCC GGACAATGAC CTCCAGGGAG GCGTCCTCGA ATACCTCGAC TCGGTCCTCG TCGCCTTCCG GGAAGACATG TCGGGCTTCA CCTCTTCCGA TCCTCCCGAT CCTCGGAACG TGCCGCTGCT TCTCTTCACG CAGGGATAG
|
Protein sequence | MAQVLDLEEK RLGKLSPRDL AGELMKVPAK KRLELILQRS DAASVVAAME VRDYYFSVME IGPDDALPLL AMANVEQLIH LFDLEWWEAD RVKVSRAIEW LERIEKANER NLLEWLYKVD FELLVILFKK WIRVQLMPDD TDPVEAREQL PRNTIDDVYF WEALYPQYED LINRMLSLLF EAHPGFYREL MNAAIWALDP EMEEDAYRFH RGRMEDQAIP DFYDALEVYR SIGLREIKAD KQPFESPSEE FRPPAFALAL IPEGDLLDRA LQEVRRKSSL DLVQMELASL ANKVIVADRL PPEEPEMLRR AVEKTVACVN LGLELLSDGD LAVAVGAVEN IHLEQLFRLA QTEIGNLRNR LLELLRGGWL SRWPEGIRCL DREWLERAEL LIRRTPKLLR PASTAGARSG EDFFRRESDL LEAGRFIESV SRIGRLYAAL MPDPDLLDRK LWRGGQIGSL AEVTLGSMIL TSASRAVLDG QWRLDLIPLE RWPVLFGLAR PETLRKVIVQ WAQTVLPDND LQGGVLEYLD SVLVAFREDM SGFTSSDPPD PRNVPLLLFT QG
|
| |