Gene Sfum_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0164 
Symbol 
ID4461445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp197165 
End bp197929 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content57% 
IMG OID639700919 
ProductABC transporter related 
Protein accessionYP_844301 
Protein GI116747614 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.269134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTCA TCGAGGACCT GCAGGTTGAA CTTGCAGGCC AGGTCATACT CAAGCACATC 
GACTTGGAAA TCAAATGGGG AGAGACGCAC GTGCTCTTCG GCCCGAACGG TTCGGGCAAG
ACGTCCCTGC TGATGACCAT TATGGGCTAT CCGCAGTACA AGGTGATCGG CGGCAGGATC
CTGTTCAAGG GCGTGGACAT TACGTATATG CCCATCAACG AACGGGCCCG GCTGGGCATC
GGGATGTCCT ACCAGCGACC GCCGACGATT CACGGCCTGA GGATTCGCGA CATCGTCGGT
ATTTGCGCGC GCCGTGAAGT CCCCGTGGAA GACCTGGCCC GGAGGGTGGA TTTCGAGGAG
TTCCTGGACC GGGACGTGAA TGCGGGGTTT TCCGGCGGAG AGATCAAACG CTCCGAGTTG
CTCCAACTGC TGGCGCAGAA TCCCGACCTG ATGCTCTTCG ATGAACCCGA ATCCGGCGTG
GACCTCGAAA ACATCGCCCT TGTGGGAAAC ACCATTGCGG AGCTGCTCCA GAAAGAACTC
GAGCCAACCC TGCTCAAGTC GCGCCTGAGG ATGATGCGTG AACGCACGAA GATGGGACTG
ATCATCACTC ATACCGGTTA CATCCTCGAC TACGTCGAGG TGGACAAGGG ACAGGTTCTT
TACGACGGGG TCCTGAGCTG TTCGACCAAC CCCCGCGAAA TTCTCAGATG CATCGGCGAA
ATGGGTTACG AGGAATGTGT GCGATGTACG ATCGACAGGA ACTGA
 
Protein sequence
MLLIEDLQVE LAGQVILKHI DLEIKWGETH VLFGPNGSGK TSLLMTIMGY PQYKVIGGRI 
LFKGVDITYM PINERARLGI GMSYQRPPTI HGLRIRDIVG ICARREVPVE DLARRVDFEE
FLDRDVNAGF SGGEIKRSEL LQLLAQNPDL MLFDEPESGV DLENIALVGN TIAELLQKEL
EPTLLKSRLR MMRERTKMGL IITHTGYILD YVEVDKGQVL YDGVLSCSTN PREILRCIGE
MGYEECVRCT IDRN