Gene Sfum_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0157 
Symbol 
ID4461438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp191014 
End bp192060 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content60% 
IMG OID639700912 
Productmetal dependent phosphohydrolase 
Protein accessionYP_844294 
Protein GI116747607 
COG category[R] General function prediction only 
COG ID[COG3481] Predicted HD-superfamily hydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.961708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGAAGA CCTTTATCGC CGACATTCAG CCCAACCAGG ATATCGCGGC GGCTTTCGTC 
GTGAGCGAGA AGCAGCTGCG GACCACCCGC TCCGGAACGG CGTTCCTCAC GCTTCGGCTT
GTCGACAGGA CGGGAGAGAT CACCGGCCGT GTCTGGGACA ACGCGGCGGA GCTTGCCGCC
GTCATCCCTC TCAAGGGAGC GGTGTTCCTG CGCGGTCGCA GCGAGACGTA TCGGGACGAA
ATGCAGTTGA ACATCCAGGA AGCTCGTCCA CTGAAACCGG AAGCCGTCGA CCCGGCGGAT
TTCCTCCCGG TGTGCCCGAC GGACCGGGAT GTTCTGTTCG AGAAACTGAG CGGGCGCATA
TCGGAGGTTG AAGACCGGCC CTGCAAACAG CTGCTCAAAG CCATCTTCAA GGATCGGGTT
CTGCTGTCCC GGTTCAAGTC GGCACCGGCG GCCAAATCGA TGCACCATGC CTATCTCGGG
GGGTTGCTCG AACATACGCT TTCCGTCGTG GAACTCGTTC TCCGCATCTG CCGGCTGTAC
CCGTTTCTCG ACCGGGACCT GCTCGTGGCC GGCGCCATAT TGCACGACAT CGGGAAGACC
GATGAGTACG TTTACGACCT CGCCATCGAC TATTCCCACT CCGGCCGTTT GCTGGGCCAC
ATGGTTCTCG GCGTCCAGAT CGTGGATGAG AAACTTCGTC TTTTGAAGGA CTTTCCCGAG
GAAAAAGCCT GGCTGATCAA GCACATGATT CTCAGCCACC ACGGCGAGGC GGAATTCGGT
GCCGCGAAGC TCCCCATGAC GAGGGAGGCC TTCGTCCTTC ACCACGCCGA CGATCTGGAC
GCGAAGATGA ACAACCTGAC CCGGATCCTG TCGGAGCCCA AAATGGGGAA CGAGGTGTGG
ACCGCCTACC AACCGCTGTT CGAACGATTC TTCTACCGTG GCCTGCCCAA AGAGCAGGCG
GAAACCCCGC CCCTCGAAGG GGAAGAGACT GAAGATGAAC GAGGGGTTCA GCTGAATCTC
TGGAACCCGG AAAAACCGAA GAAGTAA
 
Protein sequence
MSKTFIADIQ PNQDIAAAFV VSEKQLRTTR SGTAFLTLRL VDRTGEITGR VWDNAAELAA 
VIPLKGAVFL RGRSETYRDE MQLNIQEARP LKPEAVDPAD FLPVCPTDRD VLFEKLSGRI
SEVEDRPCKQ LLKAIFKDRV LLSRFKSAPA AKSMHHAYLG GLLEHTLSVV ELVLRICRLY
PFLDRDLLVA GAILHDIGKT DEYVYDLAID YSHSGRLLGH MVLGVQIVDE KLRLLKDFPE
EKAWLIKHMI LSHHGEAEFG AAKLPMTREA FVLHHADDLD AKMNNLTRIL SEPKMGNEVW
TAYQPLFERF FYRGLPKEQA ETPPLEGEET EDERGVQLNL WNPEKPKK