Gene Sfum_0151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0151 
Symbol 
ID4461432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp183521 
End bp184996 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content57% 
IMG OID639700906 
Productmethyltransferase type 12 
Protein accessionYP_844288 
Protein GI116747601 
COG category[H] Coenzyme transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.319391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.961708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACA AGGCTCAGAA GCGAGAACTT TTCGACTCCC AGGCAGCGCG GCGAGACCAT 
TGGAAGCAGA AAAACCAATA TTATTACAAG GAATTGGAAT CATTCCTCTC CTTCCTTATC
CCGAGCGATG CATCGGTCCT CGAAATAGGA TGCGGCACCG GCGACCTGCT GGCGCGGCTG
AATCCTCCGT GGGGGCATGG CATCGACTTT TCTCCCGCGA TGATCGAAGT CGCCAGGAGG
AAGTATCCGC CCGACCGGTT CGAGAATCTG GCCTTTTCGG TCGATGATAT CGAGGACTTG
AAACACCGGG ACACGTACGA CCATATCATC ATGTCCGATG TGCTCGGGGA TTTGACGGAC
GTGTGGGCCG CTTTCAGGAA CATGCGAACG GTATGCCATC CGGGCAGCCG GGTCATCATC
ACGTACTTCA ATCCCTTGTG GGAGCCCGTG CTGCGACTGG GTGAACGCCT GGGAATGAAA
ATACCCCAGG ATTATCAAAA CTGGCTGTCG CTGAACGATA TTCACAATCT CCTGGATTTG
AACGGCTTCG AAGTCATCAA GAAGGGGCAG CTGCTTCTCC TGCCCAAACA GGTCCCGTTT
CTTTCAACCT TTCTGAACCG TTACGTCGCC AAGATTCCGT TGCTGTGCAG GTTGCCCCTG
GTCGTGTACC TCATTGCCCG GCCGGTGGTT CCCGAACGGA CTCCGGACCG CAGGCCGTCC
GTTTCGGTCA TCGTCCCGTG CCGCAATGAG GAAGGGAACA TCCGGCCGGC GGTGGAACGC
ATTCCCGAGA TGGGAAGTCA TACGGAAATC CTTTTCGTGG ATGGGCTGTC CACGGATGGA
ACCGTGGCCG CCATCGAAGA TGCCATAGGG GAATTCAAGG GGATCAAGGA CATCAAGCTT
CTGCACCAGG TCCCACCCGG CACCGGTCAT GCGGGGCGCG AGGGCAAGAT GCTCAAACTG
GGCAAGGGGG ACGCGGTTCG AAAGGGCTTT GCCGCCGCCT CGGGAGACAT CCTCATGATC
CTCGACGCGG ACCTGACCGT CCCGCCCGAG GACCTGCCGA AATTCTACCT GGCCCTCACC
GAAGGGGTCG GAGAATTCAT CAACGGCACG CGCCTCATCT ACCCGATGGA GGAGCAGGCC
ATGCGCTTCC TGAACAAACT CGGGAACAAG TTCTTCAGCC TGGCGTTCAC CTGGCTGCTC
GACCAGCGCA TCAGAGACAC GCTTTGCGGG ACAAAGGTCC TCTTCAAGAA GGATTACCAG
AAGATTGCCA ACGGCAGGAG CTTTTTCGGA GACTTCGATC CGTTCGGGGA CTTCGACCTG
CTCTTCGGAG CGGCCAAGCT GAACCTCAAG ATTGTAGAGG TTCCCATCAG GTACCGACGT
CGAACGTACG GGGACATAAA AATCGAGCGG TTCAAGCACG GTTTGATTCT GCTGAAAATG
AGCGGCGTGG CGATGCGGAA GTTAAAACTG CGCTGA
 
Protein sequence
MKDKAQKREL FDSQAARRDH WKQKNQYYYK ELESFLSFLI PSDASVLEIG CGTGDLLARL 
NPPWGHGIDF SPAMIEVARR KYPPDRFENL AFSVDDIEDL KHRDTYDHII MSDVLGDLTD
VWAAFRNMRT VCHPGSRVII TYFNPLWEPV LRLGERLGMK IPQDYQNWLS LNDIHNLLDL
NGFEVIKKGQ LLLLPKQVPF LSTFLNRYVA KIPLLCRLPL VVYLIARPVV PERTPDRRPS
VSVIVPCRNE EGNIRPAVER IPEMGSHTEI LFVDGLSTDG TVAAIEDAIG EFKGIKDIKL
LHQVPPGTGH AGREGKMLKL GKGDAVRKGF AAASGDILMI LDADLTVPPE DLPKFYLALT
EGVGEFINGT RLIYPMEEQA MRFLNKLGNK FFSLAFTWLL DQRIRDTLCG TKVLFKKDYQ
KIANGRSFFG DFDPFGDFDL LFGAAKLNLK IVEVPIRYRR RTYGDIKIER FKHGLILLKM
SGVAMRKLKL R