Gene Sfum_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0149 
Symbol 
ID4461430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp181371 
End bp182174 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content57% 
IMG OID639700904 
Producthypothetical protein 
Protein accessionYP_844286 
Protein GI116747599 
COG category[S] Function unknown 
COG ID[COG1852] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.691923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.569731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC GCCTAACCTC GTTCAAGATG CCTCCCGGAC AGCCGGAGAA AAAGACCATT 
CTCATCCTGG TCGCTCTAAC GGCCGTTTTG CTGACGATCC TCCTGGTTCT GTTCTACATC
GTTCCCTACT ACGGGTTCAG TCGCATCCAT GCAGGTCTGC CCATCGTGAT GGGGGTTCTG
GTCGCCGCTG TCGGGGGGTT CGTGGTTCTC AGCCTCGTGC TTCTCATGGT GGTATTCATC
GTGGGACACG ACGTGCCGTT TTCGAAGAAA TTGCGCAGTA TTGCCGTCAA GGGGCTGCTG
CCGACCCTGA CCGTCGTGGG CAAGTTGATC GGACTGCGCA AGGAGGAAGT CCAGCACGCT
TTTGTGGCCG TGAACAATGA GCTCGTGATG GCTCAATGCA GAAACGGACA TCCACCCAGG
AACGTTCTGC TGTTGATGCC GCACTGCCTT CAGAACGCCG ACTGCCCGGT GAAAATCACC
TACCGGGTCG AGAATTGCAA GCGGTGCGGC AAATGCCGGA TCAAAGATCT GCTCGATCTT
TCGGAAAAAT ACGGAGTGAG CCTCGCGGTG GCGACGGGAG GGACCATCGC GCGCAGGATC
GTGATCGAAA AAAGGCCCGA CCTGATCATC GCCGTCGCTT GCGAACGGGA TCTAACGAGC
GGGATACAGG ATACCACGCC TCTGCCGGTC TACGGCATCT TCAACCAGCG TCCTTTCGGT
CCGTGCCTGA ACACCCAGGT TGCCATGGAC CAGGTCGAAT CGATCCTCAA GGAGGTGATG
GAGATCAACC GGGAAAAATC ATGA
 
Protein sequence
MTQRLTSFKM PPGQPEKKTI LILVALTAVL LTILLVLFYI VPYYGFSRIH AGLPIVMGVL 
VAAVGGFVVL SLVLLMVVFI VGHDVPFSKK LRSIAVKGLL PTLTVVGKLI GLRKEEVQHA
FVAVNNELVM AQCRNGHPPR NVLLLMPHCL QNADCPVKIT YRVENCKRCG KCRIKDLLDL
SEKYGVSLAV ATGGTIARRI VIEKRPDLII AVACERDLTS GIQDTTPLPV YGIFNQRPFG
PCLNTQVAMD QVESILKEVM EINREKS