| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0147 |
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| Symbol | def |
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| ID | 4461514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 179888 |
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| End bp | 180400 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639700902 |
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| Product | peptide deformylase |
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| Protein accession | YP_844284 |
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| Protein GI | 116747597 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.48044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.567274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCATTC TGGACATCTG TACATACCCC GATCCCATCT TACGCCAGAA AGCCGCCTCC
GTCGAAAACA TCGACGAGGC GCTCATTAAA TTAATAGACG ACATGACCGA AACCATGTAC
GAGGCTCCCG GCATCGGACT GGCCGCAAAT CAGGTCGGCA GATCGCTCAG CCTCATTGTG
GTCGACTTGC AGCGTCAGGA CGAAGAGCAT GGCCTGATCG TGCTGATAAA CCCGCAGATC
GTGGCGACTC AAGGAGAAAT CACCTGGGAG GAAGGGTGCC TCAGCGTTCC CGAGTACTTT
TCCGCGGTAA AACGCCATGC GGAGGTGGTG GTTCGCGGGT ATGGCCGGGA TGGGAAAGAA
ATGGAAATTC AGGCAGGCGG CCTCCTTGCC GTGGCATTGC AGCACGAAAT CGATCATCTT
GAAGGCCGCT TGTTCATCGA TCGATTGAAT CCCATCACCA GGGACATTTT CAAGAGGAAA
TGGAAGAAAA AACTGAAAGA GGCTACAGCA TAG
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| Protein sequence | MAILDICTYP DPILRQKAAS VENIDEALIK LIDDMTETMY EAPGIGLAAN QVGRSLSLIV
VDLQRQDEEH GLIVLINPQI VATQGEITWE EGCLSVPEYF SAVKRHAEVV VRGYGRDGKE
MEIQAGGLLA VALQHEIDHL EGRLFIDRLN PITRDIFKRK WKKKLKEATA
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