Gene Sfum_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0142 
Symbol 
ID4461509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp172908 
End bp174206 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content60% 
IMG OID639700897 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_844279 
Protein GI116747592 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGA CATCCTGGGG CAGATTCCCC CGGATCGATG CCGTAGGGCA TACCCCTCGA 
AACGAAGCCG CGCTCAGAGC CTGCGTCCTG GCGGGAGGGG AAAAGATCGC CCACGGCATG
GGCCGCAGCT ACGGGGACAG CGCCTTGAAC CGCGAGGTCA TCCTCACCGG CGGGTTCAGG
TATTTCCTGG ATTTCGACTC GAAGACGGGA ATCATCACCT GTGAAGCCGG AGTGTCCCTG
TCCGACATCA TCGATGTGAT TCTGCCGCGG GGGTGGTTTC TGCCCGTGAC GCCGGGCACA
AGGTTCGTAT CGCTGGGAGG CGCGATCGCC AGTGACGTGC ACGGCAAGAA TCACCACCTG
TCGGGATCCT TTTGCGATCA CGTGCTCGGT TTCGACCTGA TGATCGCAGA CGGTGCCACG
GTCCGGTGTT CCAGGAGCGA AAACGAGGAC TTGTTTCACG CCACCTGCGG GGGAATGGGG
CTCACGGGGG TGATCCTGCG GGGGAGCTTT CGGTTGCAGA AGGTGAAAAG CTGCCTGATC
AGGCAGGAAA TCTTCAAAGC TGCCAACCTT TCGGAAGTGA TCGCTTTATT TGAGGAAAAG
AGTGCATGGA GCTACTCCGT GGCATGGATC GACTGTCTCG CGACGGGGAC GAAGCTGGGA
CGGTCGCTCC TGATGGTCGG CGAACACGCC GACAAGGGCA CCCTGTTCCG CAGCCCGGCA
AAGACTCTCT CGGTTCCCTT CGATTTTCCG CGGTTCTGCC TGAACCGGTA CTCCGTTTCG
GCGTTCAATC ACCTGTATCA TCGACGCAAG GGAGCTTCAA CGGGGGAACA AACGGTTTCA
CTGGACCACT TCTTCTTTCC GCTGGATTCC ATCCTGCACT GGAACAGGAT CTACGGGGCC
GGCGGATTCA CTCAATATCA GTTCGTGTTG CCGAAAGCCG CCGGCGTAGA GGGGCTGAGG
GCCATACTGG CCCGGATCGC CCGATCGGGC CGGGGCTCGT TTCTCGCCGT GTTGAAGCTC
TTCGGCAAAG GCAACGACAA CCTGCTCTCC TTCCCCATGG AAGGTTTCAG CCTGGCGCTT
GACTTCAAGA TCGAGCGCGG TCTTTTCCCG CTCCTGGACG AGTTGGACCA CATCGTCACG
GATCATGGAG GCCGCCTGTA CCTGGCCAAG GACACGCGCA TGCGAGCCGG CGTTTTTCGT
CGGGGATATC CGAAGTGGGA GGTGTTTCGC GGCATTCGGG AAACGCATGG GCTGGTGGAC
AGGTTCAATT CCCTTCAAGC CAGGCGACTG GAGATCTGA
 
Protein sequence
MEMTSWGRFP RIDAVGHTPR NEAALRACVL AGGEKIAHGM GRSYGDSALN REVILTGGFR 
YFLDFDSKTG IITCEAGVSL SDIIDVILPR GWFLPVTPGT RFVSLGGAIA SDVHGKNHHL
SGSFCDHVLG FDLMIADGAT VRCSRSENED LFHATCGGMG LTGVILRGSF RLQKVKSCLI
RQEIFKAANL SEVIALFEEK SAWSYSVAWI DCLATGTKLG RSLLMVGEHA DKGTLFRSPA
KTLSVPFDFP RFCLNRYSVS AFNHLYHRRK GASTGEQTVS LDHFFFPLDS ILHWNRIYGA
GGFTQYQFVL PKAAGVEGLR AILARIARSG RGSFLAVLKL FGKGNDNLLS FPMEGFSLAL
DFKIERGLFP LLDELDHIVT DHGGRLYLAK DTRMRAGVFR RGYPKWEVFR GIRETHGLVD
RFNSLQARRL EI