Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0136 |
Symbol | |
ID | 4461503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 168224 |
End bp | 169528 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639700892 |
Product | integrase catalytic subunit |
Protein accession | YP_844274 |
Protein GI | 116747587 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0324788 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAGAA AAACGTTACG TTTCCTCTCA AGGAAAGCCT TGGGAGGAAG ACACATGGTC AAGCGCGAAC TTTGGTATGA GGTCCAGAGC CGGTTCAAGT TGAAGGAATC GAAGAAATCG ATTGCCCGAT CCCTGGAATT GAGTGTGCAA ACGGTCCGAA GCGTTCTCAA GCAGAAGGCG GCTCCGAGCT ACCGCCGGGG GCCGGGGAAG CGCACGCTGT TGTCCCCTTT CGAGGACCAC ATCCACAGGC GACTGGCGGC ACTCGGCTAC TGCTCCCGGG CGATTTACGA AGAGCTGGTG GAACAGGGGT ACACCGGTTG TTACGACACG GTAAGACGCT TTGTTCAGCC TTTGCGCAAG GAAGCGCAGA CAAAAGCCAC GATGCGTTTT GAAACCCCGC CCGGACGGCA GGCGCAGGTG GACTGGGGGC AATGTTGGAC CCTCATTTCG GGTAAGAGAA TCAAGGTCCA TCTGTTCGTC ATGACCCTTG GCTACAGCCG GCGTCTTTTT GCGAAGGCGA CCTGGGATGA GAGGCTTGCA ACGTTTTTGG CTTGTCACGA GGAAGCGTTC GAGCACTTTG GGGGCGCCGC CCATGAGCTC GTCTACGATA ACGCCAAAAC GGTCGTGGTC TCGCGCGACG TCGAGGGACG AAACGTGAAG TGGAATGCGA CCTTCTGGGA CTTCAGCACC TACTACGGTT TCCGGGCCTG GGCCCATCGC CCCTACCGGG CTCAAACCAA GGGCAAGGTG GAATCGGGCG TGCGCTATGT CAAGCGTTTC GTGAGAGGCA AGGCCTTCGA ATCCATGGCT CATCTGAACA CGCTCCTTGG CCGGTGGCTG GCAACGGTTG CCGATCTGAG GATTCACGGC ACAACCCATC AGCGTCCCAT CGATCTTTTC GAGCAGGAAC GGACTTTGCT CCTGCCCACC GGGGCCAAGC CCCCTTACCA GGTCCGGGAA CGTGCCGTGC GCTATGTGGC CCGGGACTGC ATGGTAAGCT TTGAAACCAA CCGCTATTCG GTGCCGCTGC GGTTTGTGGG AAAACCGGTC GAGGTTCAGT GCGCAAACGA TCGCATTCTG ATTTTCCACG AGGGGAGTCT CATCGTGAGC CATCCTTGTT GCACGGGCAA ACACCAGTCC CTGGTGGACC GGGAGCACTA CACCGGGATC TTCTACGGCA TCGAGCTTCC CTCGGTGCGC ATGCTCGCCT TCGACCACGC TCTTCCCCTT TGCAGCCGGG AGGAGGTGGA AGTTCGAGAC CTTGCCTTCT ACGAGCGCCT CGCGCAGGAA GGAGGTGCCT CATGA
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Protein sequence | MRRKTLRFLS RKALGGRHMV KRELWYEVQS RFKLKESKKS IARSLELSVQ TVRSVLKQKA APSYRRGPGK RTLLSPFEDH IHRRLAALGY CSRAIYEELV EQGYTGCYDT VRRFVQPLRK EAQTKATMRF ETPPGRQAQV DWGQCWTLIS GKRIKVHLFV MTLGYSRRLF AKATWDERLA TFLACHEEAF EHFGGAAHEL VYDNAKTVVV SRDVEGRNVK WNATFWDFST YYGFRAWAHR PYRAQTKGKV ESGVRYVKRF VRGKAFESMA HLNTLLGRWL ATVADLRIHG TTHQRPIDLF EQERTLLLPT GAKPPYQVRE RAVRYVARDC MVSFETNRYS VPLRFVGKPV EVQCANDRIL IFHEGSLIVS HPCCTGKHQS LVDREHYTGI FYGIELPSVR MLAFDHALPL CSREEVEVRD LAFYERLAQE GGAS
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