| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0132 |
|---|
| Symbol | |
|---|
| ID | 4461499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 165054 |
|---|
| End bp | 165428 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639700888 |
|---|
| Product | putative transmembrane potein |
|---|
| Protein accession | YP_844270 |
|---|
| Protein GI | 116747583 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0144788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAGG TACGTGAATT CATAAAACTG GCGAGAATAT ACCAATATAC CAAGAACGTG
CCGGTCTTTC TTCCCGCGGT CTTCAGTTAC AAACTCAACG ACTGGACCGC CCTGGCGACC
GCGGCAGGCG CATTCCTGGC GTTTTGCGGA ATGGCGAGCA GTGTTTATGT GCTCAACGAC
ATACTGGACA TCGACGAGGA TCGCCATCAT CCCGCAAAGC GGCATCGGCC GCTGGCGTCA
GGCAAAATTA CAGTCAGAGA GGCGAGCTGC TTTGGAATTG CCCTGGGATT TTTGTCCATC
GTTTTCAGCG TGTTGCTTCT TCCATATTCT TCTCTAACCC GCATTATTCA CGAGGCTTGG
CGAGAAAGCC GTTGA
|
|---|
| Protein sequence | MSKVREFIKL ARIYQYTKNV PVFLPAVFSY KLNDWTALAT AAGAFLAFCG MASSVYVLND
ILDIDEDRHH PAKRHRPLAS GKITVREASC FGIALGFLSI VFSVLLLPYS SLTRIIHEAW
RESR
|
|---|
| |