| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0131 |
|---|
| Symbol | |
|---|
| ID | 4461498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 161949 |
|---|
| End bp | 163694 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639700887 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_844269 |
|---|
| Protein GI | 116747582 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000619516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGTCA AACTGAGGCA TTATTTAAGG TGTTATAATA AGAATACAGA ACTCAACATA
TTGAACTTGT TTTCTGCGAG GCAGAATATG TGGTCAGGAT CATTTTCCTC TTCATACTCC
TGTTGGAAGC GAACATGGGT AACATTACCA ATTGGTTTAC TCCTACTGGT AATCCGAACT
TGGCCCAGAC TGCTTCATCC TGAAGTTTGG CAAGAAGATG GGACATACAA TTTGCCTGGA
TTTTTCCAGA ATGGCCTCAC TGATCTATTG GAACCAGTAA ATGGATATTT GATTGTTGTA
CCCAAAATGA TCACAATGCT GTCAGTTTCA ATCAGCATTA CTCAATACCC AATGATCAGC
ACATTTTTGG CTTGTGGTGT TATGTTGGTG GTTTTCTACA TTGTGGCAAC TGCGCCAATT
CACATACATG GAGGCATATT ACTCGCAGCT GCTTGTCTCT TGTTGCCAAG TAATCCTGAG
GTCTTCGGTC TACCTCTTTA TAGCTTTTGG TGGACATCAA TTCTACTTTT TGTCGTTGTG
TTTTGGAACG CCAATCAGAA CGATTGGATA TTGAGAGCAG TGATTATTAT AATGGCATCG
CTTTCATCTC CAGTCTGTAT TGCCACATTG CCACTTTTGT GGGTGAGGGT ATGTTTCTTA
CGCAAGAATC CACGGGAAAT ATCCCTTACA TTGCTTGCCA CATCTTGTGT TGCGATTCAG
ATTTGGATAA TGATTCATAG CAATATTTAT GTAGTATCAC AAATTAACAT AGCATCATTT
TATTTAATCA TTACAAAATT CATTGGATCA TATGCAATAG GTAATATTTT CCCTATGTTT
AGATGGTATT TTGGACTTTT TATTCTGTCT TTGTTGATTG TCACAGTTCT TCGTGACCTG
CGATCACCGG CGAAGTGGGG ACTGGCCTAT CTTTTGTGTG CAACCATACT CATGTCGATA
AGTCGGCTCA GCATCAATCA TCTTCACCAG GCCATCGGCT CGCCACGCTA TTTCTTTTTC
CCGTTCATCA TTCTTTCCTG GTTTCTATTG CAGATTGCCC TGACTGAAAC GAGTCGATTG
CTCCGGATGG GGGCATTATT CATCCTGTGT CTCTCTATAC TGAACGCCAT CCCCGTCCTT
GACAGGAAGC ACGACGATTT GAATTGGGCA ACGCATTTGG CCTCATGTCC GCATTTCAAG
GAGTACGAGC TGCCCGTTCA TATTGATGGC AACATTGCAG GAACATGGGC TTTGAAATTG
ACAAAGCAGC AATGCAATTC CCTGCTGGAC AAAGATCCTT TCTTCAAACC CGCGGTGACT
GGGGGCTTCC CGTTCCGGGT TATCCGGAAA CACCCAGATG ACCGACCGTT TGAGCAGAAC
GATGTGACCG TTGCAATCAA CAAGGTGCAA CCGGGCAATG AGTGGCTGGG TGCAGATCCG
CAGAAATCTC ACAAGAACGG TATCGTCGTT CTCGGGAGTT TCATGGATTC CGGTGCGGGC
ACAGGATCAC TCACCCTGAA AATGAGGCGT GGCGATAAGT TGCTCTATCG CTCAGGCCTG
CTGAGAAGCG GGCAGTTCAT CGAAGTTCAG GCACCTCTGT TCCGCGTCAC GACATCGCCG
GTTGCCAGAG AGTGGGTGCA GCTGGATTTT TCCAACGATC TTCTTCCGGA TGAGTTTTCC
GTGATATTCT CTGATCGAAG CACAGACTGG CATGAATGGT CGGCCATTAT GCTGAAGGCC
GATTGA
|
|---|
| Protein sequence | MVVKLRHYLR CYNKNTELNI LNLFSARQNM WSGSFSSSYS CWKRTWVTLP IGLLLLVIRT
WPRLLHPEVW QEDGTYNLPG FFQNGLTDLL EPVNGYLIVV PKMITMLSVS ISITQYPMIS
TFLACGVMLV VFYIVATAPI HIHGGILLAA ACLLLPSNPE VFGLPLYSFW WTSILLFVVV
FWNANQNDWI LRAVIIIMAS LSSPVCIATL PLLWVRVCFL RKNPREISLT LLATSCVAIQ
IWIMIHSNIY VVSQINIASF YLIITKFIGS YAIGNIFPMF RWYFGLFILS LLIVTVLRDL
RSPAKWGLAY LLCATILMSI SRLSINHLHQ AIGSPRYFFF PFIILSWFLL QIALTETSRL
LRMGALFILC LSILNAIPVL DRKHDDLNWA THLASCPHFK EYELPVHIDG NIAGTWALKL
TKQQCNSLLD KDPFFKPAVT GGFPFRVIRK HPDDRPFEQN DVTVAINKVQ PGNEWLGADP
QKSHKNGIVV LGSFMDSGAG TGSLTLKMRR GDKLLYRSGL LRSGQFIEVQ APLFRVTTSP
VAREWVQLDF SNDLLPDEFS VIFSDRSTDW HEWSAIMLKA D
|
|---|
| |