Gene Sfum_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0127 
Symbol 
ID4460437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp156744 
End bp158093 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content57% 
IMG OID639700883 
Producthypothetical protein 
Protein accessionYP_844265 
Protein GI116747578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.181077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA AATTGGGTCC GGCCTGTTTG ATCGCCCTGG TTCTGATCAC CGCACTGGGA 
TTTTACATGA GGTGCGAATC GGTTTCGGAA ACCAAGGTCA CCAAACCTTT GCGATCGGAT
GCCCTGGACT ATTTCTGTTA CGCGTACAAT CTGCGCCACA AAGGCACATA TTCCCGCGAA
GGCCTGGTTC TATCCGACAT CGGGGCCCCC GCTTCCCCGG ACGCAGTGCG TTCACCGGGA
TACCCCCTTT TTCTCCTGCC GTTCGTGGAC AGTCCGCCCA CCCATGCAAT GCTCGGCAAG
ATTGTGTTGA CCCAGGCCGT TCTGAGCACG CTGACCATCC TGATCGCGTT CTTCTTCTTC
CTCAAATTCC TCCCCCGCCC TGCATCGTTG GTCGCCACGC TGCTGACCGC GCTGAGCCCG
CATCTCATCG TCGGCAACAG TTATATCCTG TCGGAAAGTC TCTTCTGTTT CCTGCTCGTG
CTGTCCGCCT GGGCTTCGAG CCTGCTCCCG AAAAGTCCTT CTCCATTGCG CGCCGGGCTC
ACGGGGCTAT CGATGGGACT TGCCTCCCTG GTGCGCCCGG TTCTTCAGTA TCTGCCCGTA
GCCATGTTCA TTCCCCTCAT CCGTGATTTC GGACGCGCAA AAGGACTCAA ACTCGGTGCG
TTTCTGCTCC TGGGGTGCAT GCTCGCACTC TCGCCGTGGC TCACCCGCAA CATGTCCGTG
CAAGACAAGC CGGGCGACAA CAACCTGATG ATCGATTTCC TTCACCACGG CATCTACCCG
GATTTTATGT TCAACAATGA CCCCAATTCA TATGCTTTTC CATACCGCTT CGACCCCCGA
ACTCCTCAAA TAGGGGCGAA CCTCGGTTCC GTCCTCAAGG AGGTCTTGAC TCGGTTTATC
GACCAGCCCG CGCCGCACCT TAAATGGTTT CTCGTTGGAA AACCGGTCGA ATTCTGGTCC
TGGAACACCG TCCAGGGAGT TGGGGATGCC TTTATCTATC CGATCTCCAG CACTCCGTAC
ACGAACAGGA GACTCTTCGC ATGGACCCAT TCATGCATGT ATTACCTGCA CTGGCCTCTG
GTGGCTCTGT GCCTGCTCGG AAGCCTGCTG GCCTGGCACT CGTCGGCGAT GCGCGTGTTC
GAGCCCGCTA CAGCGGGCGT TACCAGGCTG GCCTCCTGCT ATGTTCTCTA TTTTACGCTC
GTGCACATGA TCGGTGCGCC GTTTCCACGC TATGCATTTC CACTCCGGCC TTTCCAGTTC
GGAATGGCCG TCTTCACAGT CGTTCTCATC CATCGCCATG CGCGAAACCG GTTCCGCCGT
TCCGCGCATG GCGTCAGCGC CGCGTCGTGA
 
Protein sequence
MIKKLGPACL IALVLITALG FYMRCESVSE TKVTKPLRSD ALDYFCYAYN LRHKGTYSRE 
GLVLSDIGAP ASPDAVRSPG YPLFLLPFVD SPPTHAMLGK IVLTQAVLST LTILIAFFFF
LKFLPRPASL VATLLTALSP HLIVGNSYIL SESLFCFLLV LSAWASSLLP KSPSPLRAGL
TGLSMGLASL VRPVLQYLPV AMFIPLIRDF GRAKGLKLGA FLLLGCMLAL SPWLTRNMSV
QDKPGDNNLM IDFLHHGIYP DFMFNNDPNS YAFPYRFDPR TPQIGANLGS VLKEVLTRFI
DQPAPHLKWF LVGKPVEFWS WNTVQGVGDA FIYPISSTPY TNRRLFAWTH SCMYYLHWPL
VALCLLGSLL AWHSSAMRVF EPATAGVTRL ASCYVLYFTL VHMIGAPFPR YAFPLRPFQF
GMAVFTVVLI HRHARNRFRR SAHGVSAAS