| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0121 |
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| Symbol | groEL |
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| ID | 4460431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 146644 |
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| End bp | 148275 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639700877 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_844259 |
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| Protein GI | 116747572 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0222262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAC AGCTGATCTA CGATGTCAAA GCTCGCGAAG CTTTGCTGAG CGGAGTGAAT
ATTCTGGCGG ACGCAGTGAA GGTAACGCTT GGTCCCAAAG GCCGCAACGT GGTGATTGAA
AAGGCATTCG GCGGGCCTAC CGTGACCAAG GACGGCGTGA CCGTTGCCAA GGAAATCGAG
CTCGAGGACA AGTTCGAGAA CATGGGTGCC CAGATGGTGA AGGAAGTCGC CAGCAAGACC
AGCGACGTTG CCGGTGACGG GACCACCACG GCGACCATAC TCGCTCAGTC CATCTATTAC
GAAGGTTCCA AGCTGGTTGC CGCCGGTGCC AATCCCATGG CGCTCAAGCG CGGCATCGAA
AAGGCTGTGC AGGTGGTGGT GGACGAACTG AAGAAGATCA GCAAGCCCAC CAAGGACCAG
AAGGAAATCG CCCAGGTCGG CACCATTTCG GCGAACAACG ATCCCACCAT CGGCAACATC
ATCGCCGAAG CCATGAACAA GGTGGGCAAG GAAGGTGTGA TCACGGTCGA GGAAGCCAAG
GCCATGGAGA CAACCCTGGA AGTTGTCGAG GGCATGCAGT TCGATCGCGG CTATATTTCC
CCGTATTTCG TGACCGACCC CGAAAAGATG GAAGTCCTTC TGAACGAACC CCTGATTCTC
ATCAACGAGA AGAAGATCAG CAACATGAAG GACCTGCTGC CGGTCCTGGA GCAGATCGCC
AAGATGGGCA GACCGTTGCT GATCATTGCC GAAGACGTCG AAGGCGAAGC GCTGGCCACC
CTGGTGGTGA ACAAGCTGCG CGGAACGCTG CATGTGTGCG CCGTGAAGGC ACCGGGATTC
GGCGATCGCC GCAAGGCCAT GCTCGACGAC ATCGCCATTC TGACCGGCGG CCAGGTGATC
AGTGAAGAGA AGGGCATCAA GCTCGAGTCC GTCGGGCTGA ACGATCTCGG GAAAGCAAAG
ACCATCCGGA TCGACAAGGA CAACACCACC ATCGTCGACG GCGCGGGCGA TCGCAAGGCG
CTCGAAGGGC GGGTGCGCCA GATTCGGACC CAGATCGACG AGACCACCAG CGATTACGAC
CGTGAGAAGC TGCAGGAGCG GCTGGCAAAA ATGGTCGGCG GAGTGGCGGT CATCAGTGTC
GGCGCGGCCA CCGAAACCGA AATGAAAGAG AAGAAGGCGC GCGTCGAGGA CGCTTTGAAC
GCTACCCGGG CCGCAGTGGA GGAAGGCATC GTTCCCGGCG GCGGAGTGGC CTATCTGCGC
TGCCTCGGGG CACTGGGAGC GGTGAACCTG GAAGGCGACG AAAAACTGGG GCTCAACATC
GTCAAACGCG CACTTGAAGA GCCCGCCCGC CAGATTGCCA TGAATGCCGG TGAGGAAGGC
TCCGTAATCG TGCAGAGGGT CAAGTCCGAA ACGGGCGCTT TCGGTTTCGA CGCGGAAACC
AGCCAGTTCT GCGACCTCAT CGAAGCGGGT GTCATCGATC CGACCAAAGT GACCCGTACC
GCTCTGCTCA ACGCGGCCAG CGTTTCGGCA TTGATGCTGA CCACCGAGTG CATGGTTTCG
GAAATCCCGA AAGAGGACAA GGGAGCCCCT GCAGGGATGG GCGGAATGCC CCCCGGAGGC
GGAATGTACT AA
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| Protein sequence | MAKQLIYDVK AREALLSGVN ILADAVKVTL GPKGRNVVIE KAFGGPTVTK DGVTVAKEIE
LEDKFENMGA QMVKEVASKT SDVAGDGTTT ATILAQSIYY EGSKLVAAGA NPMALKRGIE
KAVQVVVDEL KKISKPTKDQ KEIAQVGTIS ANNDPTIGNI IAEAMNKVGK EGVITVEEAK
AMETTLEVVE GMQFDRGYIS PYFVTDPEKM EVLLNEPLIL INEKKISNMK DLLPVLEQIA
KMGRPLLIIA EDVEGEALAT LVVNKLRGTL HVCAVKAPGF GDRRKAMLDD IAILTGGQVI
SEEKGIKLES VGLNDLGKAK TIRIDKDNTT IVDGAGDRKA LEGRVRQIRT QIDETTSDYD
REKLQERLAK MVGGVAVISV GAATETEMKE KKARVEDALN ATRAAVEEGI VPGGGVAYLR
CLGALGAVNL EGDEKLGLNI VKRALEEPAR QIAMNAGEEG SVIVQRVKSE TGAFGFDAET
SQFCDLIEAG VIDPTKVTRT ALLNAASVSA LMLTTECMVS EIPKEDKGAP AGMGGMPPGG
GMY
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