| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0119 |
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| Symbol | |
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| ID | 4460429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 144442 |
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| End bp | 146157 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639700875 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_844257 |
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| Protein GI | 116747570 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.412791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGTCG ACTACGACCT GGAGGTAAAT ACAATCAACG GTGAGTTGGC GTTGCGCAGG
AAGATACAGG GGCTGCTCCT CTTTCGGTTG CTGCTTGCTG TATTCTTCCT GCTGCTCACC
ATCATCGTGC AGAGCCGGCG CGATCAGGAC CTCCTCTCCG CCCATCTTCA GCCCATCTAC
TTCTTTTCCT GCATCCTTTT CGTTTTCACC ATCGTGGGGG CGCTCAGCCT AGGACGTATC
CGGAACCTGA AGCGATTTGC CTACGTCCAG TTGTTTTTCG ACGTGGGAGC GGTGACCGTG
CTGATTTACC TGTCGGGCGG CGTGGAAAGC CTGTTCTCAT TTCTCTACAT GCCCGTCATC
ATTTGCGCCG CCGTGCTCCT CTACCGCCGC GGGAGTCTGC TCACCGCGGC CTTCAGCAGC
GTCTGTTACG GAACCTTGCT GGATCTTCAG TATTTCGGGT GGCTGCTTCC CCTACACGTG
GTCAACCAAA CCGCTCAAGC GCGGGACAGC GGCTCCTATT TCCACAGCAT CCTCATGAAC
ATCGCCGTTT TTTACCTGGT TGCGTTCATG AGCGGTTATC TGGCGGAGGA ACTGCAAAAA
TCCAGTCTGA AGATCGTCGA ACAGAGCAAG GACCTTCGGC GCCTGGAGGT TCTGCATCGG
AACATCGTCC ACAGCATCAC CAGCGGTCTC ATAACCATCG GGCCGAGCGG AGAAATCCTC
TTCTGCAACA ACTTCGCACA GGACATCCTC GGGTTGCGCT CCGAGCCGGT CACGGGTCGC
CGGTTTTCGT CCATTTTCCC CGGCCTCGAT CCCTTGACGT GGCCTCGAGT GGTCGGCCCG
GGACCAGGAC ATAAAAAAGG GCCTCCGGAA CGCCCTGAAA TCGTTTATCG AAACCCTCTC
GGCGAGGAGC TTCACCTGGG GTATGCCGTC TCCGTTCTCC AGAATGAGAC CGGCAAATGG
GCCGGATGGA TCTTCATCTT TCAGGACCTG ACCCAGTTCA AGGCCATGGA GGAGCACCTC
AAGCGCCTGG AACGGCTTGT GTTTGCGGGG CGGATTGCGG CGGAGATTTC ACACGAGATC
AAGAACCCCC TCGCGGCGAT GAGCGGCGCG GTGCAGATGC TCGAGGATGA GTCGATCCCC
GACGGCAGCC GGGCGCGGTT GATGAGTATC ATTCATCGCG AGATCGATCG AATGAACAGC
CTCGTGAAGG ACTTTCTGTG GCTTGCAAAG AGCACTCACG GTCCGGAGAA TGTCGAAAAC
GTGCCGGTGT GCGATCTCAT CCAGGAAATC CTCGATCTTC TGAGCGCGCG GAACCGGGTC
GCGTCCGAAC ACGTCATCAA GACCGCATTC GCGGCCTCTC CCATTTCGCG CATCGACCCC
CACCATTTCA GGCAGATCGT GTGGAATCTG CTCGTGAACG CGCTGGACGC CATGCCCGGA
GGCGGCCATC TGACGATTGC CGTTGGATTG CACCCCTCAG GCGACGGCTC CGGCCGGGAA
ACCCGGATCG ATATCAGCGA TTCCGGGTCC GGGATTCCGC GGGACGCGCG GACGCGCATC
TTCGAACCGT TCTTCACCAC GAAGAGCCAG GGAACCGGCC TGGGGCTCAG CATCGTCTAT
CACCTTGTTG AAAAGGCGAA CGGCCGCATC GAAGTCACCC ATCACGAAGA ACCGTGCGGT
ACCACCTTCT CGCTTTTTTT CCCCCTTGCA TCCTGA
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| Protein sequence | MQVDYDLEVN TINGELALRR KIQGLLLFRL LLAVFFLLLT IIVQSRRDQD LLSAHLQPIY
FFSCILFVFT IVGALSLGRI RNLKRFAYVQ LFFDVGAVTV LIYLSGGVES LFSFLYMPVI
ICAAVLLYRR GSLLTAAFSS VCYGTLLDLQ YFGWLLPLHV VNQTAQARDS GSYFHSILMN
IAVFYLVAFM SGYLAEELQK SSLKIVEQSK DLRRLEVLHR NIVHSITSGL ITIGPSGEIL
FCNNFAQDIL GLRSEPVTGR RFSSIFPGLD PLTWPRVVGP GPGHKKGPPE RPEIVYRNPL
GEELHLGYAV SVLQNETGKW AGWIFIFQDL TQFKAMEEHL KRLERLVFAG RIAAEISHEI
KNPLAAMSGA VQMLEDESIP DGSRARLMSI IHREIDRMNS LVKDFLWLAK STHGPENVEN
VPVCDLIQEI LDLLSARNRV ASEHVIKTAF AASPISRIDP HHFRQIVWNL LVNALDAMPG
GGHLTIAVGL HPSGDGSGRE TRIDISDSGS GIPRDARTRI FEPFFTTKSQ GTGLGLSIVY
HLVEKANGRI EVTHHEEPCG TTFSLFFPLA S
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