Gene Sfum_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0109 
Symbol 
ID4461391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp132962 
End bp133678 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content64% 
IMG OID639700865 
Producthypothetical protein 
Protein accessionYP_844247 
Protein GI116747560 
COG category[S] Function unknown 
COG ID[COG2454] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.37479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.739242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACC GGTTCCCGGG CTTGCATGAT GAGCGGCAAT GGGTGCTCAA TCAGGCCGCC 
GCCGACTTCT ACCTCCTGCA GAATCGGCTG TACCCGCGCA GGGCCGCGCT TGAGTGGGTG
GGTAACCGAT ATCGGCTGAC CGTTCGGGAG CGGGAACTGC TCAATCGCGG TGTATTCGGG
CAGGCGGAGG CCCTTGCCCG CAAGGCCAAG AGGAGATGTG CGTCCGCCCT GGGCGGGCAA
TGTCTGGTGG TGGACGGCCA CAACGTGCAG ATAACGGTGG AGAGCGCCGT TCTGGGGCGC
CCCCTGCTCA AGGCCAACGA TGGAGCGGTG CGTGACGTGG CGGGACAGTC GGCTCGATAT
CGGCTGTCGG AAACGAGCGA GGTGGCTCTG GACATGATTT TTCAATTCCT GGGCATCTTT
CGGCCCGGGC GGGTCGATTT TCTGTTTGAT GCTCCGATGA GCCACAGCGG CATGCTGGCA
AGTGCCTGTC GACGGCGGTT GAAGTCCCTC GGGCTGGACG GCGACGCGCG CGCGGTGCCC
GTACCGGAGC GTGAAATGAC CCGGGCGGAA TGCATCGTGG CCGGCAGCGA CCGGGCGGTC
CTGGACGCCT GCAGCCGATG GCACGACCTG GCCCACGAAG TGATCGACCT TTCATGTCCC
TGCAACATGT TCGTGGATTT TTCAGACTTG ATCCTGGCTC AATCCCGGCG GTCCTGA
 
Protein sequence
MTDRFPGLHD ERQWVLNQAA ADFYLLQNRL YPRRAALEWV GNRYRLTVRE RELLNRGVFG 
QAEALARKAK RRCASALGGQ CLVVDGHNVQ ITVESAVLGR PLLKANDGAV RDVAGQSARY
RLSETSEVAL DMIFQFLGIF RPGRVDFLFD APMSHSGMLA SACRRRLKSL GLDGDARAVP
VPEREMTRAE CIVAGSDRAV LDACSRWHDL AHEVIDLSCP CNMFVDFSDL ILAQSRRS